Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.autophagy.phagophore expansion.ATG8-binding cargo receptor activities.cargo receptor protein (ATI3)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB07 1 CH_bca_445 3 8 0.00000633105
Brassica napus A06 1 CH_bna_194 4 20 0.0000000927722
Brassica rapa A06 1 CH_bra_69 4 10 0.0000000098635
Davidia involucrata GWHABJS00000001 1 CH_din_464 2 2 0.000500125
Helianthus annuus HanXRQChr17 1 CH_han_503 2 2 0.000115929
Lupinus albus Lalb_Chr01 1 CH_lal_404 2 2 0.000787236
Rosa chinensis RcHm_v2.0_Chr2 1 CH_rch_725 2 2 0.000398653
Salix brachista GWHAAZH00000019 1 CH_sbr_379 2 2 0.00063014
Trochodendron aralioides group3 1 CH_tar_513 2 2 0.000600366
Brassica carinata ChrB07 2 CH_bca_445 3 8 0.00000633105
Brassica rapa A06 2 CH_bra_69 4 10 0.0000000098635
Davidia involucrata GWHABJS00000001 2 CH_din_464 2 2 0.000500125
Helianthus annuus HanXRQChr17 2 CH_han_503 2 2 0.000115929
Lupinus albus Lalb_Chr01 2 CH_lal_404 2 2 0.000787236
Rosa chinensis RcHm_v2.0_Chr2 2 CH_rch_725 2 2 0.000398653
Salix brachista GWHAAZH00000019 2 CH_sbr_379 2 2 0.00063014
Trochodendron aralioides group3 2 CH_tar_513 2 2 0.000600366

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001