Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.protein quality control.smallHsp holdase chaperone activities.class-ER protein

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cannabis sativa NC_044373.1 1 CH_cansat_232 2 2 0.0000656642
Carpinus fangiana Cfa03 1 CH_cfa_311 2 2 0.000227204
Lactuca sativa Lsat_1_v8_lg_9 1 CH_lsa_402 2 2 0.000154202
Medicago truncatula chr1 1 CH_mtr_64 5 6 7.69467e-16
Pisum sativum chr6LG2 1 CH_psa_268 2 3 0.000156486
Quercus lobata CM012294 1 CH_qlo_819 2 2 0.000154887
Sequoiadendron giganteum chr3 1 CH_sgi_445 3 4 0.000000014239
Trifolium pratense Tp57577_TGAC_v2_scaf_260 1 CH_tpr_249 2 2 0.0000756974
Cannabis sativa NC_044373.1 2 CH_cansat_232 2 2 0.0000656642
Carpinus fangiana Cfa03 2 CH_cfa_311 2 2 0.000227204
Lactuca sativa Lsat_1_v8_lg_9 2 CH_lsa_402 2 2 0.000154202
Pisum sativum chr6LG2 2 CH_psa_268 2 3 0.000156486
Quercus lobata CM012294 2 CH_qlo_819 2 2 0.000154887
Sequoiadendron giganteum chr3 2 CH_sgi_445 3 4 0.000000014239
Trifolium pratense Tp57577_TGAC_v2_scaf_260 2 CH_tpr_249 2 2 0.0000756974

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001