Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.RUB/NEDD8 conjugation (neddylation).RUB activating E1 heterodimer.small component AXR1/AXL

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr6 1 CH_acertr_260 2 2 0.000070497
Manihot esculenta Chromosome12 1 CH_mes_338 2 3 0.000183184
Pisum sativum chr1LG6 1 CH_psa_392 2 2 0.000782452
Pisum sativum chr3LG5 1 CH_psa_393 2 2 0.000782452
Sequoiadendron giganteum chr6 1 CH_sgi_756 2 2 0.0000487151
Sapria himalayana scaffold10_15062905 1 CH_shi_69 2 2 0.0000571804
Acer truncatum chr6 2 CH_acertr_260 2 2 0.000070497
Eucalyptus grandis Chr01 2 CH_egr_820 2 4 0.000351144
Manihot esculenta Chromosome12 2 CH_mes_338 2 3 0.000183184
Pisum sativum chr1LG6 2 CH_psa_392 2 2 0.000782452
Pisum sativum chr3LG5 2 CH_psa_393 2 2 0.000782452
Sequoiadendron giganteum chr6 2 CH_sgi_756 2 2 0.0000487151
Sapria himalayana scaffold10_15062905 2 CH_shi_69 2 2 0.0000571804

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001