Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.UBP deubiquitinase activities.deubiquitinase (UBP6-7)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_10 1 CH_amhyb_117 2 2 0.0000841751
Carica papaya supercontig_131 1 CH_cpa_169 2 2 0.0000950661
Capsella rubella scaffold_3 1 CH_cru_109 3 3 0.0000000320764
Daucus carota DCARv2_Chr2 1 CH_dca_220 2 2 0.0000637775
Papaver somniferum NC_039367.1 1 CH_pso_429 2 2 0.0000675699
Utricularia gibba unitig_37 1 CH_ugi_125 2 2 0.0000734592
Amaranthus hybridus AmaHy_arrow1_Scaffold_10 2 CH_amhyb_117 2 2 0.0000841751
Carica papaya supercontig_131 2 CH_cpa_169 2 2 0.0000950661
Capsella rubella scaffold_3 2 CH_cru_109 3 3 0.0000000320764
Daucus carota DCARv2_Chr2 2 CH_dca_220 2 2 0.0000637775
Papaver somniferum NC_039367.1 2 CH_pso_429 2 2 0.0000675699
Utricularia gibba unitig_37 2 CH_ugi_125 2 2 0.0000734592

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001