Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.proteolysis.cysteine-type peptidase activities.C26-class gamma-glutamyl peptidase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-2 1 CH_aar_68 3 3 0.000000124856
Arabidopsis lyrata scaffold_7 1 CH_aly_96 3 3 0.0000000261404
Aquilegia oxysepala CHR07 1 CH_aox_293 2 2 0.000481193
Arabidopsis thaliana Chr4 1 CH_ath_135 3 5 0.000000123109
Amborella trichopoda AmTr_v1.0_scaffold00025 1 CH_atr_47 4 8 0.000000000526316
Brassica oleracea C3 1 CH_bol_411 2 2 0.000686409
Brassica oleracea C8 1 CH_bol_412 2 2 0.000686409
Brassica rapa A08 1 CH_bra_383 2 3 0.000901558
Brassica rapa A09 1 CH_bra_384 2 2 0.000901558
Cicer arietinum L. Ca_LG2_v3 1 CH_car_121 3 14 0.00003304
Corylus avellana 9 1 CH_cav_137 3 6 0.00000070527
Ceratophyllum demersum 1 1 CH_cde_34 3 3 0.000000187141
Cardamine hirsuta Chr7 1 CH_chi_371 2 2 0.000414723
Capsella rubella scaffold_7 1 CH_cru_131 3 3 0.000000080191
Davidia involucrata GWHABJS00000085 1 CH_din_163 3 4 0.00000126049
Erigeron canadensis Conyza_canadensis_scaffold:3 1 CH_eca_398 2 2 0.000269233
Eutrema salsugineum scaffold_1 1 CH_esa_79 3 3 0.0000000869853
Hydrangea macrophylla Hma1.2p1_0908F.1 1 CH_hma_362 2 3 0.000333259
Lupinus albus Lalb_Chr09 1 CH_lal_373 2 2 0.000524824
Nelumbo nucifera chr2 1 CH_nnu_129 3 3 0.00000129752
Nelumbo nucifera chr8 1 CH_nnu_8 9 12 2.03912e-26
Petunia axillaris Peaxi162Scf00038 1 CH_pax_357 2 2 0.000703556
Sequoiadendron giganteum chr3 1 CH_sgi_524 3 3 0.000000124594
Sequoiadendron giganteum chr11 1 CH_sgi_525 3 3 0.000000124594
Schrenkiella parvula ch7-5 1 CH_spa_227 2 2 0.000236202
Trochodendron aralioides group10 1 CH_tar_131 3 3 0.000000108135
Tarenaya hassleriana NW_010971389.1 1 CH_tha_56 3 3 0.000000146363
Aethionema arabicum LG-2 2 CH_aar_68 3 3 0.000000124856
Arabidopsis lyrata scaffold_7 2 CH_aly_96 3 3 0.0000000261404
Aquilegia oxysepala CHR07 2 CH_aox_293 2 2 0.000481193
Arabidopsis thaliana Chr4 2 CH_ath_135 3 5 0.000000123109
Amborella trichopoda AmTr_v1.0_scaffold00025 2 CH_atr_47 4 8 0.000000000526316
Brassica oleracea C3 2 CH_bol_411 2 2 0.000686409
Brassica oleracea C8 2 CH_bol_412 2 2 0.000686409
Brassica rapa A08 2 CH_bra_383 2 3 0.000901558
Brassica rapa A09 2 CH_bra_384 2 2 0.000901558
Cicer arietinum L. Ca_LG2_v3 2 CH_car_121 3 14 0.00003304
Corylus avellana 9 2 CH_cav_137 3 6 0.00000070527
Ceratophyllum demersum 1 2 CH_cde_34 3 3 0.000000187141
Cardamine hirsuta Chr7 2 CH_chi_371 2 2 0.000414723
Capsella rubella scaffold_7 2 CH_cru_131 3 3 0.000000080191
Davidia involucrata GWHABJS00000085 2 CH_din_163 3 4 0.00000126049
Erigeron canadensis Conyza_canadensis_scaffold:3 2 CH_eca_398 2 2 0.000269233
Eucalyptus grandis Chr09 2 CH_egr_842 2 2 0.000351165
Eutrema salsugineum scaffold_1 2 CH_esa_79 3 3 0.0000000869853
Hydrangea macrophylla Hma1.2p1_0908F.1 2 CH_hma_362 2 3 0.000333259
Lupinus albus Lalb_Chr09 2 CH_lal_373 2 2 0.000524824
Nelumbo nucifera chr2 2 CH_nnu_129 3 3 0.00000129752
Nelumbo nucifera chr8 2 CH_nnu_8 9 12 2.03912e-26
Petunia axillaris Peaxi162Scf00038 2 CH_pax_357 2 2 0.000703556
Sequoiadendron giganteum chr3 2 CH_sgi_524 3 3 0.000000124594
Sequoiadendron giganteum chr11 2 CH_sgi_525 3 3 0.000000124594
Schrenkiella parvula ch7-5 2 CH_spa_227 2 2 0.000236202
Trochodendron aralioides group10 2 CH_tar_131 3 3 0.000000108135
Tarenaya hassleriana NW_010971389.1 2 CH_tha_56 3 3 0.000000146363

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001