Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.component RanBPM/GID1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana Chr4 1 CH_ath_150 4 68 0.000000286787
Camellia sinensis var. sinensis Chr4 1 CH_camsi_789 2 5 0.000458516
Rosa chinensis RcHm_v2.0_Chr7 1 CH_rch_465 2 2 0.0000398653
Sequoiadendron giganteum chr3 1 CH_sgi_303 4 10 0.0000000000728284
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_210 2 2 0.0000929238
Arabidopsis thaliana Chr4 2 CH_ath_150 4 68 0.000000286787
Camellia sinensis var. sinensis Chr4 2 CH_camsi_789 2 5 0.000458516
Rosa chinensis RcHm_v2.0_Chr7 2 CH_rch_465 2 2 0.0000398653
Sequoiadendron giganteum chr3 2 CH_sgi_303 4 10 0.0000000000728284
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_210 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001