Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.deubiquitinase component (GID6/UBP14)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Sapria himalayana scaffold10_15062905 1 CH_shi_21 3 3 0.00000000490454
Vitis vinifera chr19 1 CH_vvi_173 3 4 0.000000347115
Vitis vinifera chr3 1 CH_vvi_426 2 2 0.00076063
Lotus japonicus chr1 2 CH_lja_309 2 2 0.000214523
Sapria himalayana scaffold10_15062905 2 CH_shi_21 3 3 0.00000000490454
Vitis vinifera chr19 2 CH_vvi_173 3 4 0.000000347115
Vitis vinifera chr3 2 CH_vvi_426 2 2 0.00076063

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001