Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.protein quality control.ribosome-associated chaperone activities.NAC chaperone heterodimer.subunit alpha

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr12 1 CH_acertr_491 2 2 0.000422982
Cicer arietinum L. Ca_LG5_v3 1 CH_car_30 4 18 0.0000000216212
Citrullus lanatus CG_Chr04 1 CH_cla_167 2 2 0.000266134
Cucumis melo chr08 1 CH_cme_299 2 2 0.000667111
Chenopodium quinoa C_Quinoa_Scaffold_1186 1 CH_cqu_541 2 2 0.000710732
Chenopodium quinoa C_Quinoa_Scaffold_3216 1 CH_cqu_542 2 2 0.000710732
Erythranthe guttata scaffold_10 1 CH_egut_204 3 4 0.00000111329
Malus domestica Chr01 1 CH_mdo_738 2 2 0.000796344
Malus domestica Chr07 1 CH_mdo_739 2 2 0.000796344
Medicago truncatula chr3 1 CH_mtr_371 4 59 0.0000014164
Punica granatum NC_045128.1 1 CH_pgr_279 2 2 0.000225107
Physcomitrium patens Chr08 1 CH_ppa_328 2 2 0.000919089
Phaseolus vulgaris Chr01 1 CH_pvu_403 2 2 0.000440836
Salvia bowleyana GWHASIU00000008 1 CH_sbo_481 2 7 0.000955349
Sechium edule LG03 1 CH_sed_330 2 2 0.000713419
Selenicereus undatus Scaffold_33676 1 CH_sun_194 2 2 0.000217992
Trifolium pratense Tp57577_TGAC_v2_LG3 1 CH_tpr_363 2 2 0.000454184
Trifolium pratense Tp57577_TGAC_v2_LG6 1 CH_tpr_364 2 2 0.000454184
Vigna mungo CM024072.1 1 CH_vmu_334 2 2 0.000387685
Acer truncatum chr12 2 CH_acertr_491 2 2 0.000422982
Cicer arietinum L. Ca_LG5_v3 2 CH_car_30 4 18 0.0000000216212
Citrullus lanatus CG_Chr04 2 CH_cla_167 2 2 0.000266134
Cucumis melo chr08 2 CH_cme_299 2 2 0.000667111
Chenopodium quinoa C_Quinoa_Scaffold_1186 2 CH_cqu_541 2 2 0.000710732
Chenopodium quinoa C_Quinoa_Scaffold_3216 2 CH_cqu_542 2 2 0.000710732
Erythranthe guttata scaffold_10 2 CH_egut_204 3 4 0.00000111329
Malus domestica Chr01 2 CH_mdo_738 2 2 0.000796344
Malus domestica Chr07 2 CH_mdo_739 2 2 0.000796344
Punica granatum NC_045128.1 2 CH_pgr_279 2 2 0.000225107
Physcomitrium patens Chr08 2 CH_ppa_328 2 2 0.000919089
Phaseolus vulgaris Chr01 2 CH_pvu_403 2 2 0.000440836
Salvia bowleyana GWHASIU00000008 2 CH_sbo_481 2 7 0.000955349
Sechium edule LG03 2 CH_sed_330 2 2 0.000713419
Selenicereus undatus Scaffold_33676 2 CH_sun_194 2 2 0.000217992
Trifolium pratense Tp57577_TGAC_v2_LG3 2 CH_tpr_363 2 2 0.000454184
Trifolium pratense Tp57577_TGAC_v2_LG6 2 CH_tpr_364 2 2 0.000454184
Vigna mungo CM024072.1 2 CH_vmu_334 2 2 0.000387685

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001