Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.autophagy.nucleation complexes.auxiliary ATG6-stability component TRAF1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_4088_HRSCAF_4107 1 CH_ama_97 2 2 0.000258665
Brassica carinata ChrC06 1 CH_bca_1007 2 2 0.00059854
Beta vulgaris Chr3_EL10_PGA_scaffold7 1 CH_bvu_190 2 2 0.0000827917
Corylus avellana 9 1 CH_cav_330 2 3 0.00023
Daucus carota DCARv2_Chr1 1 CH_dca_370 2 2 0.000382665
Durio zibethinus NW_019167849.1 1 CH_dzi_233 2 2 0.000139047
Erigeron canadensis Conyza_canadensis_scaffold:5 1 CH_eca_365 2 2 0.000134617
Helianthus annuus HanXRQChr03 1 CH_han_621 2 3 0.000347775
Medicago truncatula chr1 1 CH_mtr_626 2 2 0.000123259
Physcomitrium patens Chr17 1 CH_ppa_247 2 2 0.000367636
Sequoiadendron giganteum chr11 1 CH_sgi_418 3 3 0.00000000355983
Sapria himalayana scaffold1_25991295 1 CH_shi_113 2 2 0.0000571804
Solanum lycopersicum SL4.0ch06 1 CH_sly_485 2 2 0.000352164
Solanum pennellii Spenn-ch06 1 CH_spe_439 2 2 0.000266874
Avicennia marina ScioBoG_4088_HRSCAF_4107 2 CH_ama_97 2 2 0.000258665
Brassica carinata ChrC06 2 CH_bca_1007 2 2 0.00059854
Beta vulgaris Chr3_EL10_PGA_scaffold7 2 CH_bvu_190 2 2 0.0000827917
Corylus avellana 9 2 CH_cav_330 2 3 0.00023
Daucus carota DCARv2_Chr1 2 CH_dca_370 2 2 0.000382665
Durio zibethinus NW_019167849.1 2 CH_dzi_233 2 2 0.000139047
Erigeron canadensis Conyza_canadensis_scaffold:5 2 CH_eca_365 2 2 0.000134617
Helianthus annuus HanXRQChr03 2 CH_han_621 2 3 0.000347775
Physcomitrium patens Chr17 2 CH_ppa_247 2 2 0.000367636
Sequoiadendron giganteum chr11 2 CH_sgi_418 3 3 0.00000000355983
Sapria himalayana scaffold1_25991295 2 CH_shi_113 2 2 0.0000571804
Solanum lycopersicum SL4.0ch06 2 CH_sly_485 2 2 0.000352164
Solanum pennellii Spenn-ch06 2 CH_spe_439 2 2 0.000266874

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001