Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.RUB deconjugation.COP9 signalosome complex.component CSN8

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Capsicum annuum PGAv.1.6.scaffold1352 1 CH_can_254 2 2 0.0000826105
Coffea canephora chr2 1 CH_ccan_124 2 2 0.00000425891
Lupinus albus Lalb_Chr15 1 CH_lal_185 2 2 0.0000524824
Medicago truncatula chr2 1 CH_mtr_499 2 2 0.0000410863
Salix brachista GWHAAZH00000001 1 CH_sbr_214 2 2 0.000063014
Sequoiadendron giganteum chr5 1 CH_sgi_1206 2 2 0.000292291
Theobroma cacao Chromosome_7 1 CH_tca_334 2 2 0.000219716
Trifolium pratense Tp57577_TGAC_v2_LG2 1 CH_tpr_281 2 3 0.000227083
Capsicum annuum PGAv.1.6.scaffold1352 2 CH_can_254 2 2 0.0000826105
Coffea canephora chr2 2 CH_ccan_124 2 2 0.00000425891
Lupinus albus Lalb_Chr15 2 CH_lal_185 2 2 0.0000524824
Salix brachista GWHAAZH00000001 2 CH_sbr_214 2 2 0.000063014
Sequoiadendron giganteum chr5 2 CH_sgi_1206 2 2 0.000292291
Theobroma cacao Chromosome_7 2 CH_tca_334 2 2 0.000219716
Trifolium pratense Tp57577_TGAC_v2_LG2 2 CH_tpr_281 2 3 0.000227083

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001