Functional clusters

Information

  • Type Gene Ontology
  • Description cellular nitrogen compound metabolic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 3 CH_arhy_476 22 42 0.0000722836
Camellia sinensis var. sinensis Chr14 3 CH_camsi_158 17 19 0.00000000185471
Cicer arietinum L. Ca_LG4_v3 3 CH_car_132 19 33 0.000163145
Eucalyptus grandis Chr11 3 CH_egr_604 25 54 0.0000120887
Rhododendron simsii chr02 3 CH_rsi_433 28 67 0.000256913
Sequoiadendron giganteum chr8 3 CH_sgi_1057 26 69 0.000102964
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 4 CH_arhy_476 22 42 0.0000722836
Camellia sinensis var. sinensis Chr14 4 CH_camsi_158 17 19 0.00000000185471
Cicer arietinum L. Ca_LG4_v3 4 CH_car_132 19 33 0.000163145
Eucalyptus grandis Chr11 4 CH_egr_604 25 54 0.0000120887
Rhododendron simsii chr02 4 CH_rsi_433 28 67 0.000256913
Sequoiadendron giganteum chr8 4 CH_sgi_1057 26 69 0.000102964

Available child term results

Ontology identifier Description Number of clusters
GO:0000012 single strand break repair 6
GO:0000122 negative regulation of transcription by RNA polymerase II 14
GO:0000154 rRNA modification 10
GO:0000162 tryptophan biosynthetic process 2
GO:0000183 rDNA heterochromatin assembly 16
GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 18
GO:0000244 spliceosomal tri-snRNP complex assembly 20
GO:0000245 spliceosomal complex assembly 24
GO:0000256 allantoin catabolic process 2
GO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 2
GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening 8
GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA 10
GO:0000292 RNA fragment catabolic process 4
GO:0000350 generation of catalytic spliceosome for second transesterification step 6
GO:0000354 cis assembly of pre-catalytic spliceosome 2
GO:0000372 Group I intron splicing 10
GO:0000373 Group II intron splicing 14
GO:0000375 RNA splicing, via transesterification reactions 4
GO:0000380 alternative mRNA splicing, via spliceosome 2
GO:0000381 regulation of alternative mRNA splicing, via spliceosome 4
GO:0000387 spliceosomal snRNP assembly 2
GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation 2
GO:0000395 mRNA 5'-splice site recognition 2
GO:0000398 mRNA splicing, via spliceosome 20
GO:0000453 enzyme-directed rRNA 2'-O-methylation 2
GO:0000461 endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 4
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 2
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 8
GO:0000467 exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 16
GO:0000469 cleavage involved in rRNA processing 2
GO:0000481 maturation of 5S rRNA 2
GO:0000488 maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) 2
GO:0000495 box H/ACA RNA 3'-end processing 2
GO:0000706 meiotic DNA double-strand break processing 4
GO:0000712 resolution of meiotic recombination intermediates 2
GO:0000719 photoreactive repair 12
GO:0000720 pyrimidine dimer repair by nucleotide-excision repair 2
GO:0000723 telomere maintenance 10
GO:0000724 double-strand break repair via homologous recombination 6
GO:0000731 DNA synthesis involved in DNA repair 4
GO:0000737 DNA catabolic process, endonucleolytic 16
GO:0000963 mitochondrial RNA processing 6
GO:0000964 mitochondrial RNA 5'-end processing 10
GO:0000966 RNA 5'-end processing 24
GO:0001172 transcription, RNA-templated 12
GO:0001188 RNA polymerase I preinitiation complex assembly 8
GO:0001510 RNA methylation 4
GO:0001731 formation of translation preinitiation complex 14
GO:0002100 tRNA wobble adenosine to inosine editing 4
GO:0002103 endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) 4
GO:0002182 cytoplasmic translational elongation 20
GO:0002940 tRNA N2-guanine methylation 2
GO:0002943 tRNA dihydrouridine synthesis 24
GO:0002949 tRNA threonylcarbamoyladenosine modification 8
GO:0006065 UDP-glucuronate biosynthetic process 2
GO:0006085 acetyl-CoA biosynthetic process 2
GO:0006096 glycolytic process 20
GO:0006104 succinyl-CoA metabolic process 6
GO:0006110 regulation of glycolytic process 2
GO:0006139 nucleobase-containing compound metabolic process 8
GO:0006148 inosine catabolic process 18
GO:0006154 adenosine catabolic process 38
GO:0006167 AMP biosynthetic process 8
GO:0006169 adenosine salvage 10
GO:0006176 dATP biosynthetic process from ADP 4
GO:0006182 cGMP biosynthetic process 6
GO:0006183 GTP biosynthetic process 4
GO:0006189 'de novo' IMP biosynthetic process 4
GO:0006210 thymine catabolic process 10
GO:0006223 uracil salvage 2
GO:0006226 dUMP biosynthetic process 6
GO:0006228 UTP biosynthetic process 2
GO:0006231 dTMP biosynthetic process 2
GO:0006233 dTDP biosynthetic process 4
GO:0006259 DNA metabolic process 4
GO:0006265 DNA topological change 2
GO:0006269 DNA replication, synthesis of RNA primer 14
GO:0006270 DNA replication initiation 2
GO:0006273 lagging strand elongation 6
GO:0006281 DNA repair 16
GO:0006282 regulation of DNA repair 2
GO:0006283 transcription-coupled nucleotide-excision repair 6
GO:0006289 nucleotide-excision repair 8
GO:0006294 nucleotide-excision repair, preincision complex assembly 2
GO:0006303 double-strand break repair via nonhomologous end joining 2
GO:0006308 DNA catabolic process 40
GO:0006310 DNA recombination 4
GO:0006315 homing of group II introns 2
GO:0006342 chromatin silencing 16
GO:0006346 DNA methylation-dependent heterochromatin assembly 6
GO:0006348 chromatin silencing at telomere 6
GO:0006351 transcription, DNA-templated 10
GO:0006352 DNA-templated transcription, initiation 14
GO:0006353 DNA-templated transcription, termination 36
GO:0006355 regulation of transcription, DNA-templated 42
GO:0006357 regulation of transcription by RNA polymerase II 62
GO:0006360 transcription by RNA polymerase I 14
GO:0006364 rRNA processing 10
GO:0006367 transcription initiation from RNA polymerase II promoter 6
GO:0006368 transcription elongation from RNA polymerase II promoter 4
GO:0006369 termination of RNA polymerase II transcription 42
GO:0006370 7-methylguanosine mRNA capping 2
GO:0006376 mRNA splice site selection 8
GO:0006383 transcription by RNA polymerase III 10
GO:0006384 transcription initiation from RNA polymerase III promoter 2
GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation 8
GO:0006393 termination of mitochondrial transcription 2
GO:0006396 RNA processing 4
GO:0006397 mRNA processing 8
GO:0006400 tRNA modification 14
GO:0006412 translation 8
GO:0006413 translational initiation 8
GO:0006414 translational elongation 2
GO:0006415 translational termination 12
GO:0006417 regulation of translation 8
GO:0006418 tRNA aminoacylation for protein translation 14
GO:0006419 alanyl-tRNA aminoacylation 26
GO:0006420 arginyl-tRNA aminoacylation 24
GO:0006421 asparaginyl-tRNA aminoacylation 2
GO:0006422 aspartyl-tRNA aminoacylation 22
GO:0006423 cysteinyl-tRNA aminoacylation 2
GO:0006424 glutamyl-tRNA aminoacylation 8
GO:0006425 glutaminyl-tRNA aminoacylation 2
GO:0006426 glycyl-tRNA aminoacylation 24
GO:0006427 histidyl-tRNA aminoacylation 2
GO:0006428 isoleucyl-tRNA aminoacylation 6
GO:0006429 leucyl-tRNA aminoacylation 44
GO:0006430 lysyl-tRNA aminoacylation 16
GO:0006431 methionyl-tRNA aminoacylation 12
GO:0006432 phenylalanyl-tRNA aminoacylation 16
GO:0006433 prolyl-tRNA aminoacylation 28
GO:0006434 seryl-tRNA aminoacylation 24
GO:0006435 threonyl-tRNA aminoacylation 32
GO:0006436 tryptophanyl-tRNA aminoacylation 10
GO:0006437 tyrosyl-tRNA aminoacylation 4
GO:0006438 valyl-tRNA aminoacylation 54
GO:0006465 signal peptide processing 14
GO:0006518 peptide metabolic process 14
GO:0006557 S-adenosylmethioninamine biosynthetic process 2
GO:0006569 tryptophan catabolic process 18
GO:0006580 ethanolamine metabolic process 2
GO:0006596 polyamine biosynthetic process 6
GO:0006679 glucosylceramide biosynthetic process 2
GO:0006680 glucosylceramide catabolic process 10
GO:0006729 tetrahydrobiopterin biosynthetic process 4
GO:0006741 NADP biosynthetic process 16
GO:0006747 FAD biosynthetic process 2
GO:0006749 glutathione metabolic process 210
GO:0006780 uroporphyrinogen III biosynthetic process 4
GO:0006784 heme A biosynthetic process 22
GO:0006788 heme oxidation 2
GO:0006809 nitric oxide biosynthetic process 4
GO:0006990 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response 6
GO:0007004 telomere maintenance via telomerase 2
GO:0007131 reciprocal meiotic recombination 8
GO:0008033 tRNA processing 2
GO:0008215 spermine metabolic process 2
GO:0008380 RNA splicing 16
GO:0008618 7-methylguanosine metabolic process 12
GO:0009116 nucleoside metabolic process 50
GO:0009127 purine nucleoside monophosphate biosynthetic process 2
GO:0009134 nucleoside diphosphate catabolic process 2
GO:0009143 nucleoside triphosphate catabolic process 14
GO:0009152 purine ribonucleotide biosynthetic process 2
GO:0009166 nucleotide catabolic process 2
GO:0009173 pyrimidine ribonucleoside monophosphate metabolic process 2
GO:0009190 cyclic nucleotide biosynthetic process 2
GO:0009202 deoxyribonucleoside triphosphate biosynthetic process 2
GO:0009221 pyrimidine deoxyribonucleotide biosynthetic process 2
GO:0009228 thiamine biosynthetic process 4
GO:0009229 thiamine diphosphate biosynthetic process 2
GO:0009231 riboflavin biosynthetic process 2
GO:0009263 deoxyribonucleotide biosynthetic process 4
GO:0009299 mRNA transcription 4
GO:0009303 rRNA transcription 2
GO:0009309 amine biosynthetic process 2
GO:0009440 cyanate catabolic process 4
GO:0009447 putrescine catabolic process 8
GO:0009451 RNA modification 6
GO:0009452 7-methylguanosine RNA capping 10
GO:0009684 indoleacetic acid biosynthetic process 2
GO:0009759 indole glucosinolate biosynthetic process 20
GO:0009972 cytidine deamination 8
GO:0010024 phytochromobilin biosynthetic process 6
GO:0010213 non-photoreactive DNA repair 2
GO:0010216 maintenance of DNA methylation 2
GO:0010425 DNA methylation on cytosine within a CNG sequence 4
GO:0010426 DNA methylation on cytosine within a CHH sequence 8
GO:0010501 RNA secondary structure unwinding 8
GO:0010569 regulation of double-strand break repair via homologous recombination 8
GO:0010586 miRNA metabolic process 2
GO:0010767 regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage 4
GO:0010777 meiotic mismatch repair involved in reciprocal meiotic recombination 8
GO:0010845 positive regulation of reciprocal meiotic recombination 2
GO:0010964 regulation of heterochromatin assembly by small RNA 4
GO:0015074 DNA integration 24
GO:0015936 coenzyme A metabolic process 10
GO:0015938 coenzyme A catabolic process 2
GO:0015966 diadenosine tetraphosphate biosynthetic process 2
GO:0015969 guanosine tetraphosphate metabolic process 6
GO:0015986 ATP synthesis coupled proton transport 22
GO:0015995 chlorophyll biosynthetic process 4
GO:0016070 RNA metabolic process 6
GO:0016071 mRNA metabolic process 2
GO:0016075 rRNA catabolic process 6
GO:0016180 snRNA processing 6
GO:0016233 telomere capping 2
GO:0016444 somatic cell DNA recombination 2
GO:0016554 cytidine to uridine editing 14
GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidine 18
GO:0019277 UDP-N-acetylgalactosamine biosynthetic process 2
GO:0019305 dTDP-rhamnose biosynthetic process 6
GO:0019354 siroheme biosynthetic process 2
GO:0019365 pyridine nucleotide salvage 6
GO:0019427 acetyl-CoA biosynthetic process from acetate 2
GO:0019500 cyanide catabolic process 2
GO:0019988 charged-tRNA amino acid modification 12
GO:0030187 melatonin biosynthetic process 4
GO:0030418 nicotianamine biosynthetic process 38
GO:0030422 production of siRNA involved in RNA interference 2
GO:0030488 tRNA methylation 2
GO:0030592 DNA ADP-ribosylation 14
GO:0031054 pre-miRNA processing 2
GO:0031087 deadenylation-independent decapping of nuclear-transcribed mRNA 30
GO:0031119 tRNA pseudouridine synthesis 10
GO:0031297 replication fork processing 18
GO:0031425 chloroplast RNA processing 2
GO:0031508 pericentric heterochromatin assembly 18
GO:0031848 protection from non-homologous end joining at telomere 2
GO:0031935 regulation of chromatin silencing 8
GO:0031937 positive regulation of chromatin silencing 14
GO:0032055 negative regulation of translation in response to stress 2
GO:0032212 positive regulation of telomere maintenance via telomerase 2
GO:0032264 IMP salvage 18
GO:0032543 mitochondrial translation 8
GO:0032774 RNA biosynthetic process 2
GO:0032776 DNA methylation on cytosine 2
GO:0032784 regulation of DNA-templated transcription, elongation 14
GO:0032786 positive regulation of DNA-templated transcription, elongation 8
GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter 32
GO:0033014 tetrapyrrole biosynthetic process 2
GO:0033320 UDP-D-xylose biosynthetic process 4
GO:0033355 ascorbate glutathione cycle 22
GO:0033387 putrescine biosynthetic process from ornithine 34
GO:0033389 putrescine biosynthetic process from arginine, using agmatinase 18
GO:0033466 trans-zeatin biosynthetic process 2
GO:0033473 indoleacetic acid conjugate metabolic process 2
GO:0033512 L-lysine catabolic process to acetyl-CoA via saccharopine 2
GO:0033567 DNA replication, Okazaki fragment processing 6
GO:0033866 nucleoside bisphosphate biosynthetic process 2
GO:0034227 tRNA thio-modification 12
GO:0034243 regulation of transcription elongation from RNA polymerase II promoter 2
GO:0034248 regulation of cellular amide metabolic process 2
GO:0034355 NAD salvage 2
GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic 4
GO:0034472 snRNA 3'-end processing 2
GO:0034477 U6 snRNA 3'-end processing 8
GO:0034587 piRNA metabolic process 2
GO:0034654 nucleobase-containing compound biosynthetic process 14
GO:0034655 nucleobase-containing compound catabolic process 2
GO:0034660 ncRNA metabolic process 6
GO:0035196 production of miRNAs involved in gene silencing by miRNA 4
GO:0035278 miRNA mediated inhibition of translation 56
GO:0035336 long-chain fatty-acyl-CoA metabolic process 6
GO:0035552 oxidative single-stranded DNA demethylation 2
GO:0035600 tRNA methylthiolation 2
GO:0035825 homologous recombination 12
GO:0036265 RNA (guanine-N7)-methylation 4
GO:0036297 interstrand cross-link repair 12
GO:0042138 meiotic DNA double-strand break formation 10
GO:0042167 heme catabolic process 4
GO:0042276 error-prone translesion synthesis 36
GO:0042343 indole glucosinolate metabolic process 8
GO:0042344 indole glucosinolate catabolic process 2
GO:0042351 'de novo' GDP-L-fucose biosynthetic process 8
GO:0042726 flavin-containing compound metabolic process 2
GO:0042779 tRNA 3'-trailer cleavage 4
GO:0042793 plastid transcription 2
GO:0042794 plastid rRNA transcription 2
GO:0042819 vitamin B6 biosynthetic process 12
GO:0042868 antisense RNA metabolic process 4
GO:0043039 tRNA aminoacylation 6
GO:0043043 peptide biosynthetic process 2
GO:0043100 pyrimidine nucleobase salvage 10
GO:0043137 DNA replication, removal of RNA primer 2
GO:0043144 sno(s)RNA processing 4
GO:0043247 telomere maintenance in response to DNA damage 8
GO:0043419 urea catabolic process 4
GO:0043433 negative regulation of DNA-binding transcription factor activity 4
GO:0043484 regulation of RNA splicing 2
GO:0043603 cellular amide metabolic process 10
GO:0043619 regulation of transcription from RNA polymerase II promoter in response to oxidative stress 6
GO:0044030 regulation of DNA methylation 6
GO:0044205 'de novo' UMP biosynthetic process 2
GO:0044209 AMP salvage 8
GO:0044271 cellular nitrogen compound biosynthetic process 4
GO:0045003 double-strand break repair via synthesis-dependent strand annealing 2
GO:0045014 carbon catabolite repression of transcription by glucose 2
GO:0045292 mRNA cis splicing, via spliceosome 22
GO:0045727 positive regulation of translation 18
GO:0045739 positive regulation of DNA repair 4
GO:0045892 negative regulation of transcription, DNA-templated 8
GO:0045893 positive regulation of transcription, DNA-templated 4
GO:0045901 positive regulation of translational elongation 18
GO:0045905 positive regulation of translational termination 2
GO:0045910 negative regulation of DNA recombination 2
GO:0045943 positive regulation of transcription by RNA polymerase I 2
GO:0045944 positive regulation of transcription by RNA polymerase II 34
GO:0046104 thymidine metabolic process 4
GO:0046109 uridine biosynthetic process 2
GO:0046110 xanthine metabolic process 8
GO:0046202 cyanide biosynthetic process 2
GO:0046203 spermidine catabolic process 2
GO:0046512 sphingosine biosynthetic process 16
GO:0046514 ceramide catabolic process 6
GO:0046656 folic acid biosynthetic process 2
GO:0046710 GDP metabolic process 2
GO:0046901 tetrahydrofolylpolyglutamate biosynthetic process 6
GO:0046938 phytochelatin biosynthetic process 52
GO:0046949 fatty-acyl-CoA biosynthetic process 4
GO:0048026 positive regulation of mRNA splicing, via spliceosome 4
GO:0048255 mRNA stabilization 4
GO:0051091 positive regulation of DNA-binding transcription factor activity 6
GO:0051103 DNA ligation involved in DNA repair 24
GO:0051123 RNA polymerase II preinitiation complex assembly 12
GO:0051252 regulation of RNA metabolic process 4
GO:0051254 positive regulation of RNA metabolic process 4
GO:0051973 positive regulation of telomerase activity 14
GO:0055086 nucleobase-containing small molecule metabolic process 4
GO:0060195 negative regulation of antisense RNA transcription 2
GO:0060261 positive regulation of transcription initiation from RNA polymerase II promoter 16
GO:0060567 negative regulation of DNA-templated transcription, termination 2
GO:0061158 3'-UTR-mediated mRNA destabilization 4
GO:0061715 miRNA 2'-O-methylation 6
GO:0070158 mitochondrial seryl-tRNA aminoacylation 2
GO:0070455 positive regulation of heme biosynthetic process 4
GO:0070481 nuclear-transcribed mRNA catabolic process, non-stop decay 2
GO:0070716 mismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication 4
GO:0070829 heterochromatin maintenance 4
GO:0070897 transcription preinitiation complex assembly 4
GO:0070919 production of siRNA involved in chromatin silencing by small RNA 8
GO:0070920 regulation of production of small RNA involved in gene silencing by RNA 2
GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain 50
GO:0070966 nuclear-transcribed mRNA catabolic process, no-go decay 26
GO:0071049 nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription 2
GO:0071076 RNA 3' uridylation 18
GO:0071139 resolution of recombination intermediates 2
GO:0071932 replication fork reversal 2
GO:0072344 rescue of stalled ribosome 12
GO:0072523 purine-containing compound catabolic process 2
GO:0072527 pyrimidine-containing compound metabolic process 2
GO:0072684 mitochondrial tRNA 3'-trailer cleavage, endonucleolytic 2
GO:0080009 mRNA methylation 12
GO:0080020 regulation of coenzyme A biosynthetic process 4
GO:0080024 indolebutyric acid metabolic process 2
GO:0080028 nitrile biosynthetic process 2
GO:0080149 sucrose induced translational repression 2
GO:0080156 mitochondrial mRNA modification 10
GO:0080178 5-carbamoylmethyl uridine residue modification 2
GO:0080179 1-methylguanosine metabolic process 2
GO:0080180 2-methylguanosine metabolic process 8
GO:0090065 regulation of production of siRNA involved in RNA interference 16
GO:0090116 C-5 methylation of cytosine 4
GO:0090304 nucleic acid metabolic process 10
GO:0090309 positive regulation of DNA methylation-dependent heterochromatin assembly 2
GO:0090357 regulation of tryptophan metabolic process 2
GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic 2
GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic 4
GO:0090615 mitochondrial mRNA processing 10
GO:0090617 mitochondrial mRNA 5'-end processing 74
GO:0097167 circadian regulation of translation 4
GO:0097222 mitochondrial mRNA polyadenylation 6
GO:0097510 base-excision repair, AP site formation via deaminated base removal 12
GO:0097659 nucleic acid-templated transcription 10
GO:0098789 pre-mRNA cleavage required for polyadenylation 2
GO:0101030 tRNA-guanine transglycosylation 2
GO:0106005 RNA 5'-cap (guanine-N7)-methylation 2
GO:0106046 guanine deglycation, glyoxal removal 2
GO:1900151 regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 2
GO:1900363 regulation of mRNA polyadenylation 2
GO:1900364 negative regulation of mRNA polyadenylation 10
GO:1900486 positive regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway 8
GO:1900706 positive regulation of siderophore biosynthetic process 96
GO:1900865 chloroplast RNA modification 8
GO:1900871 chloroplast mRNA modification 8
GO:1901293 nucleoside phosphate biosynthetic process 2
GO:1901407 regulation of phosphorylation of RNA polymerase II C-terminal domain 2
GO:1901537 positive regulation of DNA demethylation 18
GO:1901847 nicotinate metabolic process 6
GO:1901918 negative regulation of exoribonuclease activity 2
GO:1901997 negative regulation of indoleacetic acid biosynthetic process via tryptophan 4
GO:1902190 2-methylbutanoyl-CoA(4-) catabolic process 6
GO:1902979 mitotic DNA replication termination 4
GO:1903311 regulation of mRNA metabolic process 22
GO:1903343 positive regulation of meiotic DNA double-strand break formation 2
GO:1903506 regulation of nucleic acid-templated transcription 4
GO:1903647 negative regulation of chlorophyll catabolic process 10
GO:1905168 positive regulation of double-strand break repair via homologous recombination 4
GO:1905642 negative regulation of DNA methylation 10
GO:1990067 intrachromosomal DNA recombination 4
GO:1990918 double-strand break repair involved in meiotic recombination 2
GO:2000042 negative regulation of double-strand break repair via homologous recombination 4
GO:2000143 negative regulation of DNA-templated transcription, initiation 48
GO:2000214 regulation of proline metabolic process 12
GO:2000232 regulation of rRNA processing 10
GO:2000234 positive regulation of rRNA processing 8
GO:2000636 positive regulation of primary miRNA processing 6
GO:2000653 regulation of genetic imprinting 2
GO:2001141 regulation of RNA biosynthetic process 10
GO:2001294 malonyl-CoA catabolic process 18

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001