Functional clusters

Information

Species	Chromosome	Experiment	Cluster id	Cluster size	Number of genes	E-value
Acer truncatum	chr4	3	CH_acertr_330	4	4	0.0000781069
Camellia sinensis var. sinensis	Chr6	3	CH_camsi_309	6	11	0.000000595836
Gossypium hirsutum	A10	3	CH_ghi_410	5	8	0.0000536013
Sapria himalayana	scaffold5_19632047	3	CH_shi_67	5	5	0.000000148746
Acer truncatum	chr4	4	CH_acertr_330	4	4	0.0000781069
Camellia sinensis var. sinensis	Chr6	4	CH_camsi_309	6	11	0.000000595836
Gossypium hirsutum	A10	4	CH_ghi_410	5	8	0.0000536013
Sapria himalayana	scaffold5_19632047	4	CH_shi_67	5	5	0.000000148746

Ontology identifier	Description	Number of clusters
GO:0000244	spliceosomal tri-snRNP complex assembly	20
GO:0000245	spliceosomal complex assembly	24
GO:0000350	generation of catalytic spliceosome for second transesterification step	6
GO:0000354	cis assembly of pre-catalytic spliceosome	2
GO:0000380	alternative mRNA splicing, via spliceosome	2
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	4
GO:0000387	spliceosomal snRNP assembly	2
GO:0000395	mRNA 5'-splice site recognition	2
GO:0000398	mRNA splicing, via spliceosome	20
GO:0006370	7-methylguanosine mRNA capping	2
GO:0006376	mRNA splice site selection	8
GO:0045292	mRNA cis splicing, via spliceosome	22
GO:0048026	positive regulation of mRNA splicing, via spliceosome	4
GO:0090615	mitochondrial mRNA processing	10
GO:0090617	mitochondrial mRNA 5'-end processing	74
GO:0097222	mitochondrial mRNA polyadenylation	6
GO:0098789	pre-mRNA cleavage required for polyadenylation	2
GO:1900363	regulation of mRNA polyadenylation	2
GO:1900364	negative regulation of mRNA polyadenylation	10

Exp id	Data type	Data filter	Min genes cluster	Max genes cluster	Max cluster size	E-value
1	MapMan	No filter applied.	2	30	80	0.001
2	MapMan	No filter applied.	2	30	80	0.001
3	GO	All GO data.	2	30	80	0.001
4	GO	All GO data.	2	30	80	0.001
5	InterPro	No filter applied.	2	30	80	0.001
6	InterPro	No filter applied.	2	30	80	0.001