Functional clusters

Information

  • Type Gene Ontology
  • Description regulation of production of siRNA involved in RNA interference

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00078 3 CH_atr_323 2 2 0.000794407
Camellia sinensis var. sinensis Chr12 3 CH_camsi_789 2 2 0.000687821
Eucalyptus grandis Chr03 3 CH_egr_485 3 4 0.000000411028
Fragaria vesca Fvb2 3 CH_fve_363 2 2 0.000589102
Gossypium hirsutum A01 3 CH_ghi_688 2 2 0.000961256
Magnolia biondii Chr01 3 CH_mbi_543 2 2 0.000291397
Selenicereus undatus Scaffold_33680 3 CH_sun_189 2 2 0.000435983
Zea mays 7 3 CH_zma_153 3 7 0.00000480213
Amborella trichopoda AmTr_v1.0_scaffold00078 4 CH_atr_323 2 2 0.000794407
Camellia sinensis var. sinensis Chr12 4 CH_camsi_789 2 2 0.000687821
Eucalyptus grandis Chr03 4 CH_egr_485 3 4 0.000000411028
Fragaria vesca Fvb2 4 CH_fve_363 2 2 0.000589102
Gossypium hirsutum A01 4 CH_ghi_688 2 2 0.000961256
Magnolia biondii Chr01 4 CH_mbi_543 2 2 0.000291397
Selenicereus undatus Scaffold_33680 4 CH_sun_189 2 2 0.000435983
Zea mays 7 4 CH_zma_153 3 7 0.00000480213

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001