Functional clusters

Information

  • Type Gene Ontology
  • Description positive regulation of transcription initiation from RNA polymerase II promoter

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_6 3 CH_aly_320 2 2 0.000660044
Arabidopsis thaliana Chr5 3 CH_ath_517 2 2 0.000286492
Brassica napus C09 3 CH_bna_112 4 10 0.000000000845828
Capsicum annuum PGAv.1.6.scaffold567 3 CH_can_366 2 2 0.000247831
Erythranthe guttata scaffold_1 3 CH_egut_109 4 7 0.0000000014184
Hydrangea macrophylla Hma1.2p1_0236F.1 3 CH_hma_239 2 2 0.000333259
Manihot esculenta Chromosome02 3 CH_mes_389 2 3 0.00054954
Pisum sativum chr7LG7 3 CH_psa_267 2 2 0.00015649
Arabidopsis lyrata scaffold_6 4 CH_aly_320 2 2 0.000660044
Arabidopsis thaliana Chr5 4 CH_ath_517 2 2 0.000286492
Brassica napus C09 4 CH_bna_112 4 10 0.000000000845828
Capsicum annuum PGAv.1.6.scaffold567 4 CH_can_366 2 2 0.000247831
Erythranthe guttata scaffold_1 4 CH_egut_109 4 7 0.0000000014184
Hydrangea macrophylla Hma1.2p1_0236F.1 4 CH_hma_239 2 2 0.000333259
Manihot esculenta Chromosome02 4 CH_mes_389 2 3 0.00054954
Pisum sativum chr7LG7 4 CH_psa_267 2 2 0.00015649

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001