Functional clusters
Information
- Type Gene Ontology
- Description positive regulation of transcription initiation from RNA polymerase II promoter
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis lyrata | scaffold_6 | 3 | CH_aly_320 | 2 | 2 | 0.000660044 |
Arabidopsis thaliana | Chr5 | 3 | CH_ath_517 | 2 | 2 | 0.000286492 |
Brassica napus | C09 | 3 | CH_bna_112 | 4 | 10 | 0.000000000845828 |
Capsicum annuum | PGAv.1.6.scaffold567 | 3 | CH_can_366 | 2 | 2 | 0.000247831 |
Erythranthe guttata | scaffold_1 | 3 | CH_egut_109 | 4 | 7 | 0.0000000014184 |
Hydrangea macrophylla | Hma1.2p1_0236F.1 | 3 | CH_hma_239 | 2 | 2 | 0.000333259 |
Manihot esculenta | Chromosome02 | 3 | CH_mes_389 | 2 | 3 | 0.00054954 |
Pisum sativum | chr7LG7 | 3 | CH_psa_267 | 2 | 2 | 0.00015649 |
Arabidopsis lyrata | scaffold_6 | 4 | CH_aly_320 | 2 | 2 | 0.000660044 |
Arabidopsis thaliana | Chr5 | 4 | CH_ath_517 | 2 | 2 | 0.000286492 |
Brassica napus | C09 | 4 | CH_bna_112 | 4 | 10 | 0.000000000845828 |
Capsicum annuum | PGAv.1.6.scaffold567 | 4 | CH_can_366 | 2 | 2 | 0.000247831 |
Erythranthe guttata | scaffold_1 | 4 | CH_egut_109 | 4 | 7 | 0.0000000014184 |
Hydrangea macrophylla | Hma1.2p1_0236F.1 | 4 | CH_hma_239 | 2 | 2 | 0.000333259 |
Manihot esculenta | Chromosome02 | 4 | CH_mes_389 | 2 | 3 | 0.00054954 |
Pisum sativum | chr7LG7 | 4 | CH_psa_267 | 2 | 2 | 0.00015649 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |