Functional clusters
Information
- Type Gene Ontology
- Description cytidine to uridine editing
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group2 | 3 | CH_ach_143 | 3 | 5 | 0.0000895072 |
| Cucumis sativus L. | chr5 | 3 | CH_csa_60 | 5 | 7 | 0.000000000201188 |
| Eucalyptus grandis | Chr06 | 3 | CH_egr_624 | 4 | 21 | 0.00002139 |
| Gossypium hirsutum | D13 | 3 | CH_ghi_361 | 3 | 3 | 0.0000122776 |
| Papaver somniferum | NC_039362.1 | 3 | CH_pso_490 | 3 | 6 | 0.000118211 |
| Quercus lobata | 4 | 3 | CH_qlo_800 | 4 | 30 | 0.000141437 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 3 | CH_rch_405 | 4 | 19 | 0.00000536449 |
| Actinidia chinensis | Lachesis_group2 | 4 | CH_ach_143 | 3 | 5 | 0.0000895072 |
| Cucumis sativus L. | chr5 | 4 | CH_csa_60 | 5 | 7 | 0.000000000201188 |
| Eucalyptus grandis | Chr06 | 4 | CH_egr_624 | 4 | 21 | 0.00002139 |
| Gossypium hirsutum | D13 | 4 | CH_ghi_361 | 3 | 3 | 0.0000122776 |
| Papaver somniferum | NC_039362.1 | 4 | CH_pso_490 | 3 | 6 | 0.000118211 |
| Quercus lobata | 4 | 4 | CH_qlo_800 | 4 | 30 | 0.000141437 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 4 | CH_rch_405 | 4 | 19 | 0.00000536449 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |