Functional clusters

Information

  • Type Gene Ontology
  • Description sphingosine biosynthetic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC01 3 CH_bca_765 2 2 0.000320646
Brassica napus A06 3 CH_bna_531 2 2 0.000278425
Brassica napus C03 3 CH_bna_532 2 2 0.000278425
Brassica oleracea C3 3 CH_bol_279 2 2 0.0000980584
Brassica rapa A06 3 CH_bra_200 2 3 0.000128794
Carya illinoinensis Chr11 3 CH_cil_342 2 2 0.0000619828
Erigeron canadensis Conyza_canadensis_scaffold:8 3 CH_eca_264 2 2 0.0000448722
Salix brachista GWHAAZH00000015 3 CH_sbr_291 2 2 0.000189042
Brassica carinata ChrC01 4 CH_bca_765 2 2 0.000320646
Brassica napus A06 4 CH_bna_531 2 2 0.000278425
Brassica napus C03 4 CH_bna_532 2 2 0.000278425
Brassica oleracea C3 4 CH_bol_279 2 2 0.0000980584
Brassica rapa A06 4 CH_bra_200 2 3 0.000128794
Carya illinoinensis Chr11 4 CH_cil_342 2 2 0.0000619828
Erigeron canadensis Conyza_canadensis_scaffold:8 4 CH_eca_264 2 2 0.0000448722
Salix brachista GWHAAZH00000015 4 CH_sbr_291 2 2 0.000189042

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001