Functional clusters

Information

  • Type Gene Ontology
  • Description mitochondrial mRNA modification

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00095 3 CH_atr_223 3 5 0.0000916369
Cucumis melo chr04 3 CH_cme_217 3 6 0.000236078
Cucumis sativus L. chr3 3 CH_csa_50 5 5 0.00000000000959251
Oryza sativa ssp. japonica chr04 3 CH_osa_469 3 9 0.000911105
Sechium edule LG02 3 CH_sed_148 3 3 0.0000198504
Amborella trichopoda AmTr_v1.0_scaffold00095 4 CH_atr_223 3 5 0.0000916369
Cucumis melo chr04 4 CH_cme_217 3 6 0.000236078
Cucumis sativus L. chr3 4 CH_csa_50 5 5 0.00000000000959251
Oryza sativa ssp. japonica chr04 4 CH_osa_469 3 9 0.000911105
Sechium edule LG02 4 CH_sed_148 3 3 0.0000198504

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001