Functional clusters
Information
- Type Gene Ontology
- Description mitochondrial mRNA modification
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00095 | 3 | CH_atr_223 | 3 | 5 | 0.0000916369 |
| Cucumis melo | chr04 | 3 | CH_cme_217 | 3 | 6 | 0.000236078 |
| Cucumis sativus L. | chr3 | 3 | CH_csa_50 | 5 | 5 | 0.00000000000959251 |
| Oryza sativa ssp. japonica | chr04 | 3 | CH_osa_469 | 3 | 9 | 0.000911105 |
| Sechium edule | LG02 | 3 | CH_sed_148 | 3 | 3 | 0.0000198504 |
| Amborella trichopoda | AmTr_v1.0_scaffold00095 | 4 | CH_atr_223 | 3 | 5 | 0.0000916369 |
| Cucumis melo | chr04 | 4 | CH_cme_217 | 3 | 6 | 0.000236078 |
| Cucumis sativus L. | chr3 | 4 | CH_csa_50 | 5 | 5 | 0.00000000000959251 |
| Oryza sativa ssp. japonica | chr04 | 4 | CH_osa_469 | 3 | 9 | 0.000911105 |
| Sechium edule | LG02 | 4 | CH_sed_148 | 3 | 3 | 0.0000198504 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |