Functional clusters

Information

  • Type Gene Ontology
  • Description DNA catabolic process, endonucleolytic

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00053 3 CH_atr_199 2 2 0.0000794407
Camellia sinensis var. sinensis Chr3 3 CH_camsi_106 4 8 0.0000000000202471
Lonicera japonica GWHAAZE00000009 3 CH_lonja_114 4 4 0.000000000000644417
Petunia axillaris Peaxi162Scf00309 3 CH_pax_52 3 3 0.00000000742514
Pisum sativum chr5LG3 3 CH_psa_264 2 3 0.000156486
Simmondsia chinensis GWHAASQ00000010 3 CH_sci_151 2 2 0.0000851426
Solanum lycopersicum SL4.0ch01 3 CH_sly_341 2 2 0.0000586941
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_81 3 3 0.0000000129529
Amborella trichopoda AmTr_v1.0_scaffold00053 4 CH_atr_199 2 2 0.0000794407
Camellia sinensis var. sinensis Chr3 4 CH_camsi_106 4 8 0.0000000000202471
Lonicera japonica GWHAAZE00000009 4 CH_lonja_114 4 4 0.000000000000644417
Petunia axillaris Peaxi162Scf00309 4 CH_pax_52 3 3 0.00000000742514
Pisum sativum chr5LG3 4 CH_psa_264 2 3 0.000156486
Simmondsia chinensis GWHAASQ00000010 4 CH_sci_151 2 2 0.0000851426
Solanum lycopersicum SL4.0ch01 4 CH_sly_341 2 2 0.0000586941
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_81 3 3 0.0000000129529

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001