Functional clusters
Information
- Type Gene Ontology
- Description indole glucosinolate biosynthetic process
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Corylus avellana | 10 | 3 | CH_cav_89 | 5 | 20 | 0.0000000174517 |
| Carya illinoinensis | Chr05 | 3 | CH_cil_261 | 3 | 3 | 0.00000391883 |
| Daucus carota | DCARv2_Chr5 | 3 | CH_dca_90 | 4 | 7 | 0.0000000194625 |
| Durio zibethinus | NW_019168048.1 | 3 | CH_dzi_43 | 5 | 7 | 0.00000000000317377 |
| Lotus japonicus | chr3 | 3 | CH_lja_169 | 3 | 5 | 0.00000644053 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 3 | CH_lsa_474 | 3 | 18 | 0.000709341 |
| Manihot esculenta | Chromosome13 | 3 | CH_mes_96 | 5 | 5 | 0.0000000000123854 |
| Punica granatum | NC_045131.1 | 3 | CH_pgr_21 | 6 | 6 | 9.18757e-17 |
| Trochodendron aralioides | group11 | 3 | CH_tar_219 | 3 | 3 | 0.00000957537 |
| Vaccinium macrocarpon | chr12_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_92 | 4 | 6 | 0.0000000361181 |
| Corylus avellana | 10 | 4 | CH_cav_89 | 5 | 20 | 0.0000000174517 |
| Carya illinoinensis | Chr05 | 4 | CH_cil_261 | 3 | 3 | 0.00000391883 |
| Daucus carota | DCARv2_Chr5 | 4 | CH_dca_90 | 4 | 7 | 0.0000000194625 |
| Durio zibethinus | NW_019168048.1 | 4 | CH_dzi_43 | 5 | 7 | 0.00000000000317377 |
| Lotus japonicus | chr3 | 4 | CH_lja_169 | 3 | 5 | 0.00000644053 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 4 | CH_lsa_474 | 3 | 18 | 0.000709341 |
| Manihot esculenta | Chromosome13 | 4 | CH_mes_96 | 5 | 5 | 0.0000000000123854 |
| Punica granatum | NC_045131.1 | 4 | CH_pgr_21 | 6 | 6 | 9.18757e-17 |
| Trochodendron aralioides | group11 | 4 | CH_tar_219 | 3 | 3 | 0.00000957537 |
| Vaccinium macrocarpon | chr12_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_92 | 4 | 6 | 0.0000000361181 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |