Functional clusters

Information

  • Type Gene Ontology
  • Description nuclear-transcribed mRNA catabolic process, no-go decay

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-7 3 CH_aar_151 2 2 0.0000912326
Acer truncatum chr8 3 CH_acertr_368 2 2 0.000211491
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 3 CH_arhy_312 3 3 0.000000611736
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 3 CH_arhy_71 6 6 2.70888e-18
Brassica oleracea C1 3 CH_bol_306 2 2 0.000196117
Brassica rapa A08 3 CH_bra_233 2 2 0.000257588
Coffea canephora chr2 3 CH_ccan_205 2 6 0.0000425888
Carica papaya supercontig_123 3 CH_cpa_204 2 3 0.000285185
Eucalyptus grandis Chr02 3 CH_egr_689 2 2 0.0000585274
Simmondsia chinensis GWHAASQ00000025 3 CH_sci_195 2 3 0.000255417
Sechium edule LG11 3 CH_sed_170 2 2 0.0000713419
Trochodendron aralioides group1 3 CH_tar_179 4 46 0.000001584
Trifolium pratense Tp57577_TGAC_v2_scaf_465 3 CH_tpr_204 2 2 0.0000756974
Aethionema arabicum LG-7 4 CH_aar_151 2 2 0.0000912326
Acer truncatum chr8 4 CH_acertr_368 2 2 0.000211491
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 4 CH_arhy_312 3 3 0.000000611736
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 4 CH_arhy_71 6 6 2.70888e-18
Brassica oleracea C1 4 CH_bol_306 2 2 0.000196117
Brassica rapa A08 4 CH_bra_233 2 2 0.000257588
Coffea canephora chr2 4 CH_ccan_205 2 6 0.0000425888
Carica papaya supercontig_123 4 CH_cpa_204 2 3 0.000285185
Eucalyptus grandis Chr02 4 CH_egr_689 2 2 0.0000585274
Simmondsia chinensis GWHAASQ00000025 4 CH_sci_195 2 3 0.000255417
Sechium edule LG11 4 CH_sed_170 2 2 0.0000713419
Trochodendron aralioides group1 4 CH_tar_179 4 46 0.000001584
Trifolium pratense Tp57577_TGAC_v2_scaf_465 4 CH_tpr_204 2 2 0.0000756974

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001