Functional clusters

Information

  • Type Gene Ontology
  • Description miRNA mediated inhibition of translation

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-11 3 CH_aar_193 2 3 0.000273685
Actinidia chinensis Lachesis_group9 3 CH_ach_170 2 2 0.000162964
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 3 CH_arhy_534 2 2 0.00017963
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 3 CH_arhy_535 2 2 0.00017963
Brassica napus A09 3 CH_bna_468 2 2 0.00011137
Brassica napus C09 3 CH_bna_469 2 2 0.00011137
Brassica oleracea C9 3 CH_bol_245 2 2 0.0000326861
Brassica rapa A09 3 CH_bra_165 2 2 0.0000429314
Corylus avellana 4 3 CH_cav_249 2 2 0.0000766695
Citrus clementina scaffold_3 3 CH_ccl_305 2 2 0.0000820311
Cardamine hirsuta Chr8 3 CH_chi_224 2 2 0.0000691204
Carya illinoinensis Chr11 3 CH_cil_456 2 2 0.000371897
Capsella rubella scaffold_5 3 CH_cru_216 2 2 0.0000731154
Gossypium hirsutum A09 3 CH_ghi_649 2 2 0.000747644
Helianthus annuus HanXRQChr17 3 CH_han_245 3 5 0.0000000895919
Lonicera japonica GWHAAZE00000009 3 CH_lonja_194 3 3 0.00000000537991
Lactuca sativa Lsat_1_v8_lg_8 3 CH_lsa_376 2 2 0.000154202
Manihot esculenta Chromosome14 3 CH_mes_89 4 5 0.0000000000034155
Olea europaea chr12 3 CH_oeu_275 2 2 0.000320273
Punica granatum NC_045134.1 3 CH_pgr_174 3 7 0.00000118211
Papaver somniferum NC_039362.1 3 CH_pso_541 2 3 0.000202761
Populus trichocarpa Chr12 3 CH_ptr_387 2 2 0.000346801
Populus trichocarpa Chr15 3 CH_ptr_388 2 2 0.000346801
Quercus lobata 10 3 CH_qlo_725 2 2 0.0000516289
Salvia bowleyana GWHASIU00000007 3 CH_sbo_408 2 4 0.000272975
Salix brachista GWHAAZH00000015 3 CH_sbr_282 2 2 0.000189042
Simmondsia chinensis GWHAASQ00000012 3 CH_sci_211 2 2 0.000255428
Zea mays 9 3 CH_zma_231 2 2 0.000153394
Aethionema arabicum LG-11 4 CH_aar_193 2 3 0.000273685
Actinidia chinensis Lachesis_group9 4 CH_ach_170 2 2 0.000162964
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 4 CH_arhy_534 2 2 0.00017963
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 4 CH_arhy_535 2 2 0.00017963
Brassica napus A09 4 CH_bna_468 2 2 0.00011137
Brassica napus C09 4 CH_bna_469 2 2 0.00011137
Brassica oleracea C9 4 CH_bol_245 2 2 0.0000326861
Brassica rapa A09 4 CH_bra_165 2 2 0.0000429314
Corylus avellana 4 4 CH_cav_249 2 2 0.0000766695
Citrus clementina scaffold_3 4 CH_ccl_305 2 2 0.0000820311
Cardamine hirsuta Chr8 4 CH_chi_224 2 2 0.0000691204
Carya illinoinensis Chr11 4 CH_cil_456 2 2 0.000371897
Capsella rubella scaffold_5 4 CH_cru_216 2 2 0.0000731154
Gossypium hirsutum A09 4 CH_ghi_649 2 2 0.000747644
Helianthus annuus HanXRQChr17 4 CH_han_245 3 5 0.0000000895919
Lonicera japonica GWHAAZE00000009 4 CH_lonja_194 3 3 0.00000000537991
Lactuca sativa Lsat_1_v8_lg_8 4 CH_lsa_376 2 2 0.000154202
Manihot esculenta Chromosome14 4 CH_mes_89 4 5 0.0000000000034155
Olea europaea chr12 4 CH_oeu_275 2 2 0.000320273
Punica granatum NC_045134.1 4 CH_pgr_174 3 7 0.00000118211
Papaver somniferum NC_039362.1 4 CH_pso_541 2 3 0.000202761
Populus trichocarpa Chr12 4 CH_ptr_387 2 2 0.000346801
Populus trichocarpa Chr15 4 CH_ptr_388 2 2 0.000346801
Quercus lobata 10 4 CH_qlo_725 2 2 0.0000516289
Salvia bowleyana GWHASIU00000007 4 CH_sbo_408 2 4 0.000272975
Salix brachista GWHAAZH00000015 4 CH_sbr_282 2 2 0.000189042
Simmondsia chinensis GWHAASQ00000012 4 CH_sci_211 2 2 0.000255428
Zea mays 9 4 CH_zma_231 2 2 0.000153394

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001