Functional clusters
Information
- Type Gene Ontology
- Description polyamine biosynthetic process
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Fragaria x ananassa | Fvb4-3 | 3 | CH_fan_303 | 3 | 4 | 0.0000218931 |
| Solanum pennellii | Spenn-ch03 | 3 | CH_spe_23 | 6 | 6 | 5.27337e-16 |
| Solanum tuberosum | ST4.03ch03 | 3 | CH_stu_364 | 3 | 5 | 0.0000448754 |
| Fragaria x ananassa | Fvb4-3 | 4 | CH_fan_303 | 3 | 4 | 0.0000218931 |
| Solanum pennellii | Spenn-ch03 | 4 | CH_spe_23 | 6 | 6 | 5.27337e-16 |
| Solanum tuberosum | ST4.03ch03 | 4 | CH_stu_364 | 3 | 5 | 0.0000448754 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0033387 | putrescine biosynthetic process from ornithine | 34 |
| GO:0033389 | putrescine biosynthetic process from arginine, using agmatinase | 18 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |