Functional clusters
Information
- Type Gene Ontology
- Description maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Chenopodium quinoa | C_Quinoa_Scaffold_1759 | 3 | CH_cqu_302 | 3 | 7 | 0.0000194355 |
| Punica granatum | NC_045129.1 | 3 | CH_pgr_393 | 3 | 19 | 0.000978403 |
| Simmondsia chinensis | GWHAASQ00000020 | 3 | CH_sci_269 | 2 | 2 | 0.000851426 |
| Sequoiadendron giganteum | HRSCAF_1 | 3 | CH_sgi_1291 | 2 | 2 | 0.000487151 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1759 | 4 | CH_cqu_302 | 3 | 7 | 0.0000194355 |
| Punica granatum | NC_045129.1 | 4 | CH_pgr_393 | 3 | 19 | 0.000978403 |
| Simmondsia chinensis | GWHAASQ00000020 | 4 | CH_sci_269 | 2 | 2 | 0.000851426 |
| Sequoiadendron giganteum | HRSCAF_1 | 4 | CH_sgi_1291 | 2 | 2 | 0.000487151 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |