Functional clusters

Information

  • Type Gene Ontology
  • Description maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Chenopodium quinoa C_Quinoa_Scaffold_1759 3 CH_cqu_302 3 7 0.0000194355
Punica granatum NC_045129.1 3 CH_pgr_393 3 19 0.000978403
Simmondsia chinensis GWHAASQ00000020 3 CH_sci_269 2 2 0.000851426
Sequoiadendron giganteum HRSCAF_1 3 CH_sgi_1291 2 2 0.000487151
Chenopodium quinoa C_Quinoa_Scaffold_1759 4 CH_cqu_302 3 7 0.0000194355
Punica granatum NC_045129.1 4 CH_pgr_393 3 19 0.000978403
Simmondsia chinensis GWHAASQ00000020 4 CH_sci_269 2 2 0.000851426
Sequoiadendron giganteum HRSCAF_1 4 CH_sgi_1291 2 2 0.000487151

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001