Functional clusters
Information
- Type Gene Ontology
- Description DNA catabolic process
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_7 | 3 | CH_aly_105 | 3 | 3 | 0.000000365965 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_14 | 3 | CH_amhyb_48 | 3 | 3 | 0.000000106286 |
| Brassica carinata | Contig959 | 3 | CH_bca_348 | 3 | 4 | 0.00000186415 |
| Brassica napus | C03 | 3 | CH_bna_399 | 3 | 7 | 0.0000278402 |
| Camellia sinensis var. sinensis | Chr1 | 3 | CH_camsi_631 | 3 | 15 | 0.000171916 |
| Corylus avellana | 11 | 3 | CH_cav_197 | 3 | 7 | 0.00001727 |
| Chara braunii | BFEA01000004 | 3 | CH_cbr_161 | 2 | 2 | 0.000431562 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 3 | CH_eca_136 | 3 | 3 | 0.000000253709 |
| Eucalyptus grandis | Chr10 | 3 | CH_egr_471 | 3 | 3 | 0.000000287747 |
| Erythranthe guttata | scaffold_5 | 3 | CH_egut_191 | 3 | 3 | 0.00000131229 |
| Gossypium hirsutum | D10 | 3 | CH_ghi_52 | 7 | 12 | 1.48547e-17 |
| Medicago truncatula | chr5 | 3 | CH_mtr_653 | 3 | 20 | 0.000345647 |
| Punica granatum | NC_045134.1 | 3 | CH_pgr_197 | 3 | 5 | 0.00000472798 |
| Prunus persica | Pp02 | 3 | CH_ppe_231 | 3 | 4 | 0.00000137729 |
| Pisum sativum | chr6LG2 | 3 | CH_psa_178 | 5 | 77 | 0.0000165867 |
| Papaver somniferum | NC_039362.1 | 3 | CH_pso_36 | 8 | 22 | 1.73165e-18 |
| Quercus lobata | 8 | 3 | CH_qlo_83 | 7 | 10 | 3.07089e-19 |
| Rhododendron simsii | chr05 | 3 | CH_rsi_90 | 5 | 8 | 0.00000000000183477 |
| Sequoiadendron giganteum | chr3 | 3 | CH_sgi_755 | 3 | 3 | 0.00000199351 |
| Trochodendron aralioides | group12 | 3 | CH_tar_152 | 3 | 3 | 0.000000454168 |
| Arabidopsis lyrata | scaffold_7 | 4 | CH_aly_105 | 3 | 3 | 0.000000365965 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_14 | 4 | CH_amhyb_48 | 3 | 3 | 0.000000106286 |
| Brassica carinata | Contig959 | 4 | CH_bca_348 | 3 | 4 | 0.00000186415 |
| Brassica napus | C03 | 4 | CH_bna_399 | 3 | 7 | 0.0000278402 |
| Camellia sinensis var. sinensis | Chr1 | 4 | CH_camsi_631 | 3 | 15 | 0.000171916 |
| Corylus avellana | 11 | 4 | CH_cav_197 | 3 | 7 | 0.00001727 |
| Chara braunii | BFEA01000004 | 4 | CH_cbr_161 | 2 | 2 | 0.000431562 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 4 | CH_eca_136 | 3 | 3 | 0.000000253709 |
| Eucalyptus grandis | Chr10 | 4 | CH_egr_471 | 3 | 3 | 0.000000287747 |
| Erythranthe guttata | scaffold_5 | 4 | CH_egut_191 | 3 | 3 | 0.00000131229 |
| Gossypium hirsutum | D10 | 4 | CH_ghi_52 | 7 | 12 | 1.48547e-17 |
| Medicago truncatula | chr5 | 4 | CH_mtr_653 | 3 | 20 | 0.000345647 |
| Punica granatum | NC_045134.1 | 4 | CH_pgr_197 | 3 | 5 | 0.00000472798 |
| Prunus persica | Pp02 | 4 | CH_ppe_231 | 3 | 4 | 0.00000137729 |
| Pisum sativum | chr6LG2 | 4 | CH_psa_178 | 5 | 77 | 0.0000165867 |
| Papaver somniferum | NC_039362.1 | 4 | CH_pso_36 | 8 | 22 | 1.73165e-18 |
| Quercus lobata | 8 | 4 | CH_qlo_83 | 7 | 10 | 3.07089e-19 |
| Rhododendron simsii | chr05 | 4 | CH_rsi_90 | 5 | 8 | 0.00000000000183477 |
| Sequoiadendron giganteum | chr3 | 4 | CH_sgi_755 | 3 | 3 | 0.00000199351 |
| Trochodendron aralioides | group12 | 4 | CH_tar_152 | 3 | 3 | 0.000000454168 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0000737 | DNA catabolic process, endonucleolytic | 16 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |