Functional clusters

Information

  • Type Gene Ontology
  • Description regulation of translation

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica rapa A03 3 CH_bra_302 5 29 0.00082046
Brassica rapa A10 3 CH_bra_68 5 6 0.0000000436638
Quercus lobata CM012294 3 CH_qlo_549 5 14 0.00000236996
Selaginella moellendorffii scaffold_0 3 CH_smo_75 4 13 0.0000153586
Brassica rapa A03 4 CH_bra_302 5 29 0.00082046
Brassica rapa A10 4 CH_bra_68 5 6 0.0000000436638
Quercus lobata CM012294 4 CH_qlo_549 5 14 0.00000236996
Selaginella moellendorffii scaffold_0 4 CH_smo_75 4 13 0.0000153586

Available child term results

Ontology identifier Description Number of clusters
GO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 2
GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening 8
GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA 10
GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidine 18
GO:0032055 negative regulation of translation in response to stress 2
GO:0035278 miRNA mediated inhibition of translation 56
GO:0045727 positive regulation of translation 18
GO:0045901 positive regulation of translational elongation 18
GO:0045905 positive regulation of translational termination 2
GO:0061158 3'-UTR-mediated mRNA destabilization 4
GO:0072344 rescue of stalled ribosome 12
GO:0080149 sucrose induced translational repression 2
GO:0097167 circadian regulation of translation 4
GO:1900151 regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001