Functional clusters
Information
- Type Gene Ontology
- Description DNA integration
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Chara braunii | BFEA01000010 | 3 | CH_cbr_149 | 23 | 80 | 0.000257128 |
| Chara braunii | BFEA01000313 | 3 | CH_cbr_186 | 9 | 13 | 0.000973811 |
| Chara braunii | BFEA01000045 | 3 | CH_cbr_87 | 24 | 79 | 0.0000358619 |
| Coffea canephora | chr4 | 3 | CH_ccan_328 | 2 | 4 | 0.000357744 |
| Erigeron canadensis | Conyza_canadensis_scaffold:8 | 3 | CH_eca_138 | 24 | 72 | 0.000000274375 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 3 | CH_eca_384 | 21 | 77 | 0.000347176 |
| Erigeron canadensis | Conyza_canadensis_scaffold:6 | 3 | CH_eca_407 | 21 | 78 | 0.000446812 |
| Erigeron canadensis | Conyza_canadensis_scaffold:4 | 3 | CH_eca_437 | 21 | 79 | 0.000572379 |
| Erigeron canadensis | Conyza_canadensis_scaffold:7 | 3 | CH_eca_449 | 21 | 80 | 0.000729937 |
| Punica granatum | NC_045127.1 | 3 | CH_pgr_234 | 6 | 63 | 0.0000315959 |
| Physcomitrium patens | scaffold_70 | 3 | CH_ppa_117 | 3 | 3 | 0.000173771 |
| Solanum pennellii | Spenn-ch04 | 3 | CH_spe_269 | 16 | 51 | 0.0000393288 |
| Chara braunii | BFEA01000010 | 4 | CH_cbr_149 | 23 | 80 | 0.000257128 |
| Chara braunii | BFEA01000313 | 4 | CH_cbr_186 | 9 | 13 | 0.000973811 |
| Chara braunii | BFEA01000045 | 4 | CH_cbr_87 | 24 | 79 | 0.0000358619 |
| Coffea canephora | chr4 | 4 | CH_ccan_328 | 2 | 4 | 0.000357744 |
| Erigeron canadensis | Conyza_canadensis_scaffold:8 | 4 | CH_eca_138 | 24 | 72 | 0.000000274375 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 4 | CH_eca_384 | 21 | 77 | 0.000347176 |
| Erigeron canadensis | Conyza_canadensis_scaffold:6 | 4 | CH_eca_407 | 21 | 78 | 0.000446812 |
| Erigeron canadensis | Conyza_canadensis_scaffold:4 | 4 | CH_eca_437 | 21 | 79 | 0.000572379 |
| Erigeron canadensis | Conyza_canadensis_scaffold:7 | 4 | CH_eca_449 | 21 | 80 | 0.000729937 |
| Punica granatum | NC_045127.1 | 4 | CH_pgr_234 | 6 | 63 | 0.0000315959 |
| Physcomitrium patens | scaffold_70 | 4 | CH_ppa_117 | 3 | 3 | 0.000173771 |
| Solanum pennellii | Spenn-ch04 | 4 | CH_spe_269 | 16 | 51 | 0.0000393288 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |