Functional clusters

Information

  • Type Gene Ontology
  • Description tRNA processing

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Sequoiadendron giganteum chr7 3 CH_sgi_725 4 7 0.00000122665
Sequoiadendron giganteum chr7 4 CH_sgi_725 4 7 0.00000122665

Available child term results

Ontology identifier Description Number of clusters
GO:0002100 tRNA wobble adenosine to inosine editing 4
GO:0002940 tRNA N2-guanine methylation 2
GO:0002943 tRNA dihydrouridine synthesis 24
GO:0002949 tRNA threonylcarbamoyladenosine modification 8
GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation 8
GO:0006400 tRNA modification 14
GO:0019988 charged-tRNA amino acid modification 12
GO:0030488 tRNA methylation 2
GO:0031119 tRNA pseudouridine synthesis 10
GO:0034227 tRNA thio-modification 12
GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic 4
GO:0035600 tRNA methylthiolation 2
GO:0042779 tRNA 3'-trailer cleavage 4
GO:0072684 mitochondrial tRNA 3'-trailer cleavage, endonucleolytic 2
GO:0080178 5-carbamoylmethyl uridine residue modification 2
GO:0101030 tRNA-guanine transglycosylation 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001