Functional clusters
Information
- Type Gene Ontology
- Description termination of RNA polymerase II transcription
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr8 | 3 | CH_acertr_367 | 2 | 2 | 0.000211491 |
| Actinidia chinensis | Lachesis_group0 | 3 | CH_ach_226 | 2 | 2 | 0.000543213 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_9 | 3 | CH_amhyb_204 | 2 | 3 | 0.000757523 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.15 | 3 | CH_arhy_348 | 3 | 3 | 0.00000178815 |
| Corylus avellana | 10 | 3 | CH_cav_369 | 2 | 2 | 0.000460017 |
| Ceratophyllum demersum | 9 | 3 | CH_cde_40 | 4 | 16 | 0.000000187941 |
| Davidia involucrata | GWHABJS00000021 | 3 | CH_din_359 | 2 | 2 | 0.000500125 |
| Gossypium hirsutum | A04 | 3 | CH_ghi_268 | 3 | 4 | 0.000000705787 |
| Gossypium hirsutum | D04 | 3 | CH_ghi_48 | 6 | 8 | 3.95059e-18 |
| Glycine max | Gm10 | 3 | CH_gma_514 | 2 | 2 | 0.00079707 |
| Glycine max | Gm19 | 3 | CH_gma_515 | 2 | 2 | 0.00079707 |
| Gossypium raimondii | Chr09 | 3 | CH_gra_128 | 3 | 5 | 0.000000172435 |
| Hydrangea macrophylla | Hma1.2p1_0084F.1 | 3 | CH_hma_144 | 2 | 2 | 0.000111086 |
| Lupinus albus | Lalb_Chr25 | 3 | CH_lal_126 | 3 | 3 | 0.000000347064 |
| Lotus japonicus | chr1 | 3 | CH_lja_308 | 2 | 2 | 0.000429046 |
| Salix brachista | GWHAAZH00000017 | 3 | CH_sbr_44 | 6 | 21 | 0.00000000000111796 |
| Theobroma cacao | Chromosome_5 | 3 | CH_tca_355 | 2 | 2 | 0.000439432 |
| Utricularia gibba | unitig_0 | 3 | CH_ugi_115 | 2 | 2 | 0.000492287 |
| Utricularia gibba | unitig_749 | 3 | CH_ugi_116 | 2 | 2 | 0.000492287 |
| Vigna mungo | CM024071.1 | 3 | CH_vmu_302 | 2 | 2 | 0.000646141 |
| Vanilla planifolia | CM028150.1 | 3 | CH_vpl_193 | 2 | 2 | 0.000073888 |
| Acer truncatum | chr8 | 4 | CH_acertr_367 | 2 | 2 | 0.000211491 |
| Actinidia chinensis | Lachesis_group0 | 4 | CH_ach_226 | 2 | 2 | 0.000543213 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_9 | 4 | CH_amhyb_204 | 2 | 3 | 0.000757523 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.15 | 4 | CH_arhy_348 | 3 | 3 | 0.00000178815 |
| Corylus avellana | 10 | 4 | CH_cav_369 | 2 | 2 | 0.000460017 |
| Ceratophyllum demersum | 9 | 4 | CH_cde_40 | 4 | 16 | 0.000000187941 |
| Davidia involucrata | GWHABJS00000021 | 4 | CH_din_359 | 2 | 2 | 0.000500125 |
| Gossypium hirsutum | A04 | 4 | CH_ghi_268 | 3 | 4 | 0.000000705787 |
| Gossypium hirsutum | D04 | 4 | CH_ghi_48 | 6 | 8 | 3.95059e-18 |
| Glycine max | Gm10 | 4 | CH_gma_514 | 2 | 2 | 0.00079707 |
| Glycine max | Gm19 | 4 | CH_gma_515 | 2 | 2 | 0.00079707 |
| Gossypium raimondii | Chr09 | 4 | CH_gra_128 | 3 | 5 | 0.000000172435 |
| Hydrangea macrophylla | Hma1.2p1_0084F.1 | 4 | CH_hma_144 | 2 | 2 | 0.000111086 |
| Lupinus albus | Lalb_Chr25 | 4 | CH_lal_126 | 3 | 3 | 0.000000347064 |
| Lotus japonicus | chr1 | 4 | CH_lja_308 | 2 | 2 | 0.000429046 |
| Salix brachista | GWHAAZH00000017 | 4 | CH_sbr_44 | 6 | 21 | 0.00000000000111796 |
| Theobroma cacao | Chromosome_5 | 4 | CH_tca_355 | 2 | 2 | 0.000439432 |
| Utricularia gibba | unitig_0 | 4 | CH_ugi_115 | 2 | 2 | 0.000492287 |
| Utricularia gibba | unitig_749 | 4 | CH_ugi_116 | 2 | 2 | 0.000492287 |
| Vigna mungo | CM024071.1 | 4 | CH_vmu_302 | 2 | 2 | 0.000646141 |
| Vanilla planifolia | CM028150.1 | 4 | CH_vpl_193 | 2 | 2 | 0.000073888 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |