Functional clusters

Information

  • Type Gene Ontology
  • Description deadenylation-independent decapping of nuclear-transcribed mRNA

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_3 3 CH_aly_363 2 2 0.000990066
Amaranthus hybridus AmaHy_arrow1_Scaffold_14 3 CH_amhyb_73 3 4 0.00000357039
Aquilegia oxysepala CHR07 3 CH_aox_116 3 3 0.00000351194
Arabidopsis thaliana Chr3 3 CH_ath_576 2 2 0.000601633
Brassica carinata ChrC05 3 CH_bca_453 3 6 0.0000182241
Fragaria x ananassa Fvb3-2 3 CH_fan_442 3 9 0.000307585
Fragaria x ananassa Fvb3-1 3 CH_fan_513 3 11 0.000603897
Fragaria vesca Fvb4 3 CH_fve_204 3 4 0.0000116572
Fragaria vesca Fvb3 3 CH_fve_67 5 11 0.000000000181988
Gossypium hirsutum D09 3 CH_ghi_273 3 3 0.00000103632
Magnolia biondii Chr15 3 CH_mbi_137 4 6 0.00000000255089
Punica granatum NC_045133.1 3 CH_pgr_86 5 13 0.000000000392995
Rosa chinensis RcHm_v2.0_Chr4 3 CH_rch_102 7 32 0.000000000000127745
Rosa chinensis RcHm_v2.0_Chr4 3 CH_rch_105 8 74 0.000000000000198247
Sapria himalayana scaffold27_7528638 3 CH_shi_111 3 7 0.00000600532
Arabidopsis lyrata scaffold_3 4 CH_aly_363 2 2 0.000990066
Amaranthus hybridus AmaHy_arrow1_Scaffold_14 4 CH_amhyb_73 3 4 0.00000357039
Aquilegia oxysepala CHR07 4 CH_aox_116 3 3 0.00000351194
Arabidopsis thaliana Chr3 4 CH_ath_576 2 2 0.000601633
Brassica carinata ChrC05 4 CH_bca_453 3 6 0.0000182241
Fragaria x ananassa Fvb3-2 4 CH_fan_442 3 9 0.000307585
Fragaria x ananassa Fvb3-1 4 CH_fan_513 3 11 0.000603897
Fragaria vesca Fvb4 4 CH_fve_204 3 4 0.0000116572
Fragaria vesca Fvb3 4 CH_fve_67 5 11 0.000000000181988
Gossypium hirsutum D09 4 CH_ghi_273 3 3 0.00000103632
Magnolia biondii Chr15 4 CH_mbi_137 4 6 0.00000000255089
Punica granatum NC_045133.1 4 CH_pgr_86 5 13 0.000000000392995
Rosa chinensis RcHm_v2.0_Chr4 4 CH_rch_102 7 32 0.000000000000127745
Rosa chinensis RcHm_v2.0_Chr4 4 CH_rch_105 8 74 0.000000000000198247
Sapria himalayana scaffold27_7528638 4 CH_shi_111 3 7 0.00000600532

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001