Functional clusters
Information
- Type Gene Ontology
- Description RNA 3' uridylation
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Aethionema arabicum | LG-5 | 3 | CH_aar_203 | 2 | 2 | 0.000273698 |
Cicer arietinum L. | Ca_LG6_v3 | 3 | CH_car_146 | 2 | 2 | 0.00023349 |
Fragaria vesca | Fvb7 | 3 | CH_fve_288 | 2 | 2 | 0.00017673 |
Magnolia biondii | Chr18 | 3 | CH_mbi_271 | 4 | 66 | 0.00000123513 |
Oryza sativa ssp. japonica | chr01 | 3 | CH_osa_340 | 2 | 2 | 0.000158437 |
Physcomitrium patens | Chr09 | 3 | CH_ppa_122 | 2 | 2 | 0.000183818 |
Rosa chinensis | RcHm_v2.0_Chr1 | 3 | CH_rch_583 | 2 | 2 | 0.000119596 |
Salvia bowleyana | GWHASIU00000003 | 3 | CH_sbo_367 | 2 | 2 | 0.000136494 |
Vigna mungo | CM024078.1 | 3 | CH_vmu_292 | 2 | 3 | 0.000581496 |
Aethionema arabicum | LG-5 | 4 | CH_aar_203 | 2 | 2 | 0.000273698 |
Cicer arietinum L. | Ca_LG6_v3 | 4 | CH_car_146 | 2 | 2 | 0.00023349 |
Fragaria vesca | Fvb7 | 4 | CH_fve_288 | 2 | 2 | 0.00017673 |
Magnolia biondii | Chr18 | 4 | CH_mbi_271 | 4 | 66 | 0.00000123513 |
Oryza sativa ssp. japonica | chr01 | 4 | CH_osa_340 | 2 | 2 | 0.000158437 |
Physcomitrium patens | Chr09 | 4 | CH_ppa_122 | 2 | 2 | 0.000183818 |
Rosa chinensis | RcHm_v2.0_Chr1 | 4 | CH_rch_583 | 2 | 2 | 0.000119596 |
Salvia bowleyana | GWHASIU00000003 | 4 | CH_sbo_367 | 2 | 2 | 0.000136494 |
Vigna mungo | CM024078.1 | 4 | CH_vmu_292 | 2 | 3 | 0.000581496 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |