Functional clusters
Information
- Type Gene Ontology
- Description transcription by RNA polymerase I
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Amborella trichopoda | AmTr_v1.0_scaffold00001 | 3 | CH_atr_324 | 2 | 2 | 0.000794407 |
Brassica carinata | ChrB06 | 3 | CH_bca_703 | 2 | 2 | 0.000213764 |
Brassica napus | C05 | 3 | CH_bna_274 | 3 | 13 | 0.00000295525 |
Carya illinoinensis | Chr12 | 3 | CH_cil_498 | 2 | 2 | 0.000619828 |
Magnolia biondii | Chr07 | 3 | CH_mbi_241 | 3 | 7 | 0.000000495247 |
Rosa chinensis | RcHm_v2.0_Chr6 | 3 | CH_rch_769 | 2 | 2 | 0.00083717 |
Sequoiadendron giganteum | chr6 | 3 | CH_sgi_1232 | 2 | 2 | 0.000292291 |
Amborella trichopoda | AmTr_v1.0_scaffold00001 | 4 | CH_atr_324 | 2 | 2 | 0.000794407 |
Brassica carinata | ChrB06 | 4 | CH_bca_703 | 2 | 2 | 0.000213764 |
Brassica napus | C05 | 4 | CH_bna_274 | 3 | 13 | 0.00000295525 |
Carya illinoinensis | Chr12 | 4 | CH_cil_498 | 2 | 2 | 0.000619828 |
Magnolia biondii | Chr07 | 4 | CH_mbi_241 | 3 | 7 | 0.000000495247 |
Rosa chinensis | RcHm_v2.0_Chr6 | 4 | CH_rch_769 | 2 | 2 | 0.00083717 |
Sequoiadendron giganteum | chr6 | 4 | CH_sgi_1232 | 2 | 2 | 0.000292291 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0001188 | RNA polymerase I preinitiation complex assembly | 8 |
GO:0045943 | positive regulation of transcription by RNA polymerase I | 2 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |