Functional clusters

Information

  • Type Gene Ontology
  • Description transcription by RNA polymerase I

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00001 3 CH_atr_324 2 2 0.000794407
Brassica carinata ChrB06 3 CH_bca_703 2 2 0.000213764
Brassica napus C05 3 CH_bna_274 3 13 0.00000295525
Carya illinoinensis Chr12 3 CH_cil_498 2 2 0.000619828
Magnolia biondii Chr07 3 CH_mbi_241 3 7 0.000000495247
Rosa chinensis RcHm_v2.0_Chr6 3 CH_rch_769 2 2 0.00083717
Sequoiadendron giganteum chr6 3 CH_sgi_1232 2 2 0.000292291
Amborella trichopoda AmTr_v1.0_scaffold00001 4 CH_atr_324 2 2 0.000794407
Brassica carinata ChrB06 4 CH_bca_703 2 2 0.000213764
Brassica napus C05 4 CH_bna_274 3 13 0.00000295525
Carya illinoinensis Chr12 4 CH_cil_498 2 2 0.000619828
Magnolia biondii Chr07 4 CH_mbi_241 3 7 0.000000495247
Rosa chinensis RcHm_v2.0_Chr6 4 CH_rch_769 2 2 0.00083717
Sequoiadendron giganteum chr6 4 CH_sgi_1232 2 2 0.000292291

Available child term results

Ontology identifier Description Number of clusters
GO:0001188 RNA polymerase I preinitiation complex assembly 8
GO:0045943 positive regulation of transcription by RNA polymerase I 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001