Functional clusters

Information

  • Type Gene Ontology
  • Description aspartyl-tRNA aminoacylation

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica oleracea C8 3 CH_bol_374 2 2 0.000686409
Capsicum annuum PGAv.1.6.scaffold786 3 CH_can_147 3 3 0.0000000409487
Chenopodium quinoa C_Quinoa_Scaffold_2187 3 CH_cqu_376 2 2 0.000142146
Fragaria x ananassa Fvb2-1 3 CH_fan_478 2 2 0.000518101
Nelumbo nucifera chr8 3 CH_nnu_280 2 3 0.000433498
Papaver somniferum NC_039367.1 3 CH_pso_488 3 23 0.000113124
Rosa chinensis RcHm_v2.0_Chr6 3 CH_rch_526 3 20 0.0000542932
Rhododendron simsii chr07 3 CH_rsi_186 4 11 0.000000055799
Rhododendron simsii chr07 3 CH_rsi_269 3 4 0.00000299772
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_209 2 2 0.0000929238
Vanilla planifolia CM028154.1 3 CH_vpl_260 2 2 0.000221664
Brassica oleracea C8 4 CH_bol_374 2 2 0.000686409
Capsicum annuum PGAv.1.6.scaffold786 4 CH_can_147 3 3 0.0000000409487
Chenopodium quinoa C_Quinoa_Scaffold_2187 4 CH_cqu_376 2 2 0.000142146
Fragaria x ananassa Fvb2-1 4 CH_fan_478 2 2 0.000518101
Nelumbo nucifera chr8 4 CH_nnu_280 2 3 0.000433498
Papaver somniferum NC_039367.1 4 CH_pso_488 3 23 0.000113124
Rosa chinensis RcHm_v2.0_Chr6 4 CH_rch_526 3 20 0.0000542932
Rhododendron simsii chr07 4 CH_rsi_186 4 11 0.000000055799
Rhododendron simsii chr07 4 CH_rsi_269 3 4 0.00000299772
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_209 2 2 0.0000929238
Vanilla planifolia CM028154.1 4 CH_vpl_260 2 2 0.000221664

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001