Functional clusters
Information
- Type Gene Ontology
- Description aspartyl-tRNA aminoacylation
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Brassica oleracea | C8 | 3 | CH_bol_374 | 2 | 2 | 0.000686409 |
Capsicum annuum | PGAv.1.6.scaffold786 | 3 | CH_can_147 | 3 | 3 | 0.0000000409487 |
Chenopodium quinoa | C_Quinoa_Scaffold_2187 | 3 | CH_cqu_376 | 2 | 2 | 0.000142146 |
Fragaria x ananassa | Fvb2-1 | 3 | CH_fan_478 | 2 | 2 | 0.000518101 |
Nelumbo nucifera | chr8 | 3 | CH_nnu_280 | 2 | 3 | 0.000433498 |
Papaver somniferum | NC_039367.1 | 3 | CH_pso_488 | 3 | 23 | 0.000113124 |
Rosa chinensis | RcHm_v2.0_Chr6 | 3 | CH_rch_526 | 3 | 20 | 0.0000542932 |
Rhododendron simsii | chr07 | 3 | CH_rsi_186 | 4 | 11 | 0.000000055799 |
Rhododendron simsii | chr07 | 3 | CH_rsi_269 | 3 | 4 | 0.00000299772 |
Vaccinium macrocarpon | chr12_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_209 | 2 | 2 | 0.0000929238 |
Vanilla planifolia | CM028154.1 | 3 | CH_vpl_260 | 2 | 2 | 0.000221664 |
Brassica oleracea | C8 | 4 | CH_bol_374 | 2 | 2 | 0.000686409 |
Capsicum annuum | PGAv.1.6.scaffold786 | 4 | CH_can_147 | 3 | 3 | 0.0000000409487 |
Chenopodium quinoa | C_Quinoa_Scaffold_2187 | 4 | CH_cqu_376 | 2 | 2 | 0.000142146 |
Fragaria x ananassa | Fvb2-1 | 4 | CH_fan_478 | 2 | 2 | 0.000518101 |
Nelumbo nucifera | chr8 | 4 | CH_nnu_280 | 2 | 3 | 0.000433498 |
Papaver somniferum | NC_039367.1 | 4 | CH_pso_488 | 3 | 23 | 0.000113124 |
Rosa chinensis | RcHm_v2.0_Chr6 | 4 | CH_rch_526 | 3 | 20 | 0.0000542932 |
Rhododendron simsii | chr07 | 4 | CH_rsi_186 | 4 | 11 | 0.000000055799 |
Rhododendron simsii | chr07 | 4 | CH_rsi_269 | 3 | 4 | 0.00000299772 |
Vaccinium macrocarpon | chr12_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_209 | 2 | 2 | 0.0000929238 |
Vanilla planifolia | CM028154.1 | 4 | CH_vpl_260 | 2 | 2 | 0.000221664 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |