Functional clusters

Information

  • Type Gene Ontology
  • Description spliceosomal complex assembly

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.10 3 CH_arhy_662 2 2 0.000628705
Amborella trichopoda AmTr_v1.0_scaffold00029 3 CH_atr_325 2 2 0.000794407
Brassica carinata ChrB04 3 CH_bca_162 3 3 0.0000000137087
Camellia sinensis var. sinensis Chr13 3 CH_camsi_213 4 17 0.0000000240718
Capsicum annuum PGAv.1.6.scaffold128 3 CH_can_375 2 2 0.000247831
Carya illinoinensis Chr16 3 CH_cil_499 2 2 0.000619828
Davidia involucrata GWHABJS00000002 3 CH_din_400 2 2 0.000750188
Helianthus annuus HanXRQChr03 3 CH_han_153 4 6 0.000000000327139
Lotus japonicus chr1 3 CH_lja_354 2 2 0.000715077
Phaseolus vulgaris Chr01 3 CH_pvu_365 2 2 0.000734727
Rosa chinensis RcHm_v2.0_Chr5 3 CH_rch_727 2 2 0.000597979
Vanilla planifolia CM028154.1 3 CH_vpl_146 4 51 0.0000105235
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.10 4 CH_arhy_662 2 2 0.000628705
Amborella trichopoda AmTr_v1.0_scaffold00029 4 CH_atr_325 2 2 0.000794407
Brassica carinata ChrB04 4 CH_bca_162 3 3 0.0000000137087
Camellia sinensis var. sinensis Chr13 4 CH_camsi_213 4 17 0.0000000240718
Capsicum annuum PGAv.1.6.scaffold128 4 CH_can_375 2 2 0.000247831
Carya illinoinensis Chr16 4 CH_cil_499 2 2 0.000619828
Davidia involucrata GWHABJS00000002 4 CH_din_400 2 2 0.000750188
Helianthus annuus HanXRQChr03 4 CH_han_153 4 6 0.000000000327139
Lotus japonicus chr1 4 CH_lja_354 2 2 0.000715077
Phaseolus vulgaris Chr01 4 CH_pvu_365 2 2 0.000734727
Rosa chinensis RcHm_v2.0_Chr5 4 CH_rch_727 2 2 0.000597979
Vanilla planifolia CM028154.1 4 CH_vpl_146 4 51 0.0000105235

Available child term results

Ontology identifier Description Number of clusters
GO:0000354 cis assembly of pre-catalytic spliceosome 2
GO:0000395 mRNA 5'-splice site recognition 2
GO:0006376 mRNA splice site selection 8

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001