Functional clusters

Information

  • Type Gene Ontology
  • Description putrescine biosynthetic process from ornithine

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aquilegia oxysepala CHR02 3 CH_aox_301 2 2 0.000801989
Durio zibethinus NW_019168004.1 3 CH_dzi_345 2 3 0.000834235
Fragaria vesca Fvb4 3 CH_fve_112 3 3 0.0000000208231
Gossypium hirsutum A11 3 CH_ghi_467 2 2 0.000160209
Gossypium hirsutum D11 3 CH_ghi_468 2 2 0.000160209
Gossypium raimondii Chr07 3 CH_gra_210 2 2 0.0000536107
Hydrangea macrophylla Hma1.2p1_0023F.1 3 CH_hma_67 3 4 0.000000296152
Medicago truncatula chr3 3 CH_mtr_544 2 3 0.000123256
Prunus persica Pp08 3 CH_ppe_295 3 34 0.000049892
Phaseolus vulgaris Chr09 3 CH_pvu_236 2 2 0.0000734727
Rosa chinensis RcHm_v2.0_Chr3 3 CH_rch_182 4 11 0.000000000940543
Rhododendron simsii chr06 3 CH_rsi_343 2 2 0.0000645307
Solanum lycopersicum SL4.0ch03 3 CH_sly_424 2 2 0.000176082
Theobroma cacao Chromosome_5 3 CH_tca_388 2 2 0.000732386
Theobroma cacao Chromosome_8 3 CH_tca_389 2 2 0.000732386
Trifolium pratense Tp57577_TGAC_v2_LG7 3 CH_tpr_274 2 2 0.000227092
Tripterygium wilfordii NC_052242.1 3 CH_twi_87 3 3 0.0000000186743
Aquilegia oxysepala CHR02 4 CH_aox_301 2 2 0.000801989
Durio zibethinus NW_019168004.1 4 CH_dzi_345 2 3 0.000834235
Fragaria vesca Fvb4 4 CH_fve_112 3 3 0.0000000208231
Gossypium hirsutum A11 4 CH_ghi_467 2 2 0.000160209
Gossypium hirsutum D11 4 CH_ghi_468 2 2 0.000160209
Gossypium raimondii Chr07 4 CH_gra_210 2 2 0.0000536107
Hydrangea macrophylla Hma1.2p1_0023F.1 4 CH_hma_67 3 4 0.000000296152
Medicago truncatula chr3 4 CH_mtr_544 2 3 0.000123256
Prunus persica Pp08 4 CH_ppe_295 3 34 0.000049892
Phaseolus vulgaris Chr09 4 CH_pvu_236 2 2 0.0000734727
Rosa chinensis RcHm_v2.0_Chr3 4 CH_rch_182 4 11 0.000000000940543
Rhododendron simsii chr06 4 CH_rsi_343 2 2 0.0000645307
Solanum lycopersicum SL4.0ch03 4 CH_sly_424 2 2 0.000176082
Theobroma cacao Chromosome_5 4 CH_tca_388 2 2 0.000732386
Theobroma cacao Chromosome_8 4 CH_tca_389 2 2 0.000732386
Trifolium pratense Tp57577_TGAC_v2_LG7 4 CH_tpr_274 2 2 0.000227092
Tripterygium wilfordii NC_052242.1 4 CH_twi_87 3 3 0.0000000186743

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001