Functional clusters

Information

  • Type Gene Ontology
  • Description DNA ligation involved in DNA repair

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC04 3 CH_bca_787 2 4 0.000384762
Capsicum annuum PGAv.1.6.scaffold285 3 CH_can_296 2 2 0.0000826105
Corylus avellana 3 3 CH_cav_94 3 4 0.0000000352693
Citrullus lanatus CG_Chr11 3 CH_cla_103 2 2 0.0000887115
Glycine max Gm09 3 CH_gma_329 2 2 0.000113867
Hydrangea macrophylla Hma1.2p1_0235F.1 3 CH_hma_156 2 2 0.000111086
Magnolia biondii Chr16 3 CH_mbi_592 2 5 0.000485625
Petunia axillaris Peaxi162Scf00231 3 CH_pax_192 2 2 0.0000703556
Pisum sativum chr1LG6 3 CH_psa_273 2 2 0.00015649
Sequoiadendron giganteum chr5 3 CH_sgi_349 4 5 0.0000000000260123
Solanum lycopersicum SL4.0ch07 3 CH_sly_422 2 2 0.000176082
Solanum pennellii Spenn-ch07 3 CH_spe_338 2 2 0.000133437
Brassica carinata ChrC04 4 CH_bca_787 2 4 0.000384762
Capsicum annuum PGAv.1.6.scaffold285 4 CH_can_296 2 2 0.0000826105
Corylus avellana 3 4 CH_cav_94 3 4 0.0000000352693
Citrullus lanatus CG_Chr11 4 CH_cla_103 2 2 0.0000887115
Glycine max Gm09 4 CH_gma_329 2 2 0.000113867
Hydrangea macrophylla Hma1.2p1_0235F.1 4 CH_hma_156 2 2 0.000111086
Magnolia biondii Chr16 4 CH_mbi_592 2 5 0.000485625
Petunia axillaris Peaxi162Scf00231 4 CH_pax_192 2 2 0.0000703556
Pisum sativum chr1LG6 4 CH_psa_273 2 2 0.00015649
Sequoiadendron giganteum chr5 4 CH_sgi_349 4 5 0.0000000000260123
Solanum lycopersicum SL4.0ch07 4 CH_sly_422 2 2 0.000176082
Solanum pennellii Spenn-ch07 4 CH_spe_338 2 2 0.000133437

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001