Functional clusters
Information
- Type Gene Ontology
- Description negative regulation of transcription by RNA polymerase II
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00057 | 3 | CH_atr_154 | 3 | 5 | 0.00000794849 |
| Medicago truncatula | chr4 | 3 | CH_mtr_358 | 3 | 3 | 0.00000115214 |
| Papaver somniferum | NC_039362.1 | 3 | CH_pso_2 | 18 | 26 | 1.52999e-51 |
| Papaver somniferum | NC_039360.1 | 3 | CH_pso_37 | 7 | 8 | 1.85179e-18 |
| Populus trichocarpa | Chr08 | 3 | CH_ptr_249 | 3 | 3 | 0.0000022802 |
| Solanum lycopersicum | SL4.0ch10 | 3 | CH_sly_149 | 4 | 4 | 0.0000000218153 |
| Tripterygium wilfordii | NC_052232.1 | 3 | CH_twi_162 | 3 | 3 | 0.00000826806 |
| Amborella trichopoda | AmTr_v1.0_scaffold00057 | 4 | CH_atr_154 | 3 | 5 | 0.00000794849 |
| Medicago truncatula | chr4 | 4 | CH_mtr_358 | 3 | 3 | 0.00000115214 |
| Papaver somniferum | NC_039362.1 | 4 | CH_pso_2 | 18 | 26 | 1.52999e-51 |
| Papaver somniferum | NC_039360.1 | 4 | CH_pso_37 | 7 | 8 | 1.85179e-18 |
| Populus trichocarpa | Chr08 | 4 | CH_ptr_249 | 3 | 3 | 0.0000022802 |
| Solanum lycopersicum | SL4.0ch10 | 4 | CH_sly_149 | 4 | 4 | 0.0000000218153 |
| Tripterygium wilfordii | NC_052232.1 | 4 | CH_twi_162 | 3 | 3 | 0.00000826806 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |