Functional clusters

Information

  • Type Gene Ontology
  • Description leucyl-tRNA aminoacylation

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr6 3 CH_acertr_438 2 2 0.000422982
Actinidia chinensis Lachesis_group8 3 CH_ach_251 2 2 0.000814819
Arabidopsis lyrata scaffold_6 3 CH_aly_322 2 2 0.000660044
Amborella trichopoda AmTr_v1.0_scaffold00106 3 CH_atr_97 3 4 0.000000151455
Brassica carinata ChrB03 3 CH_bca_699 2 2 0.000213764
Brassica napus C08 3 CH_bna_600 2 2 0.000519726
Capsicum annuum PGAv.1.6.scaffold1014 3 CH_can_290 2 2 0.0000826105
Chara braunii BFEA01000064 3 CH_cbr_136 2 2 0.000215781
Ceratophyllum demersum 2 3 CH_cde_172 2 2 0.000473878
Durio zibethinus NW_019168004.1 3 CH_dzi_208 3 22 0.0000495704
Fragaria x ananassa Fvb4-1 3 CH_fan_179 3 3 0.000000497659
Fragaria vesca Fvb4 3 CH_fve_57 4 4 0.0000000000429367
Hydrangea macrophylla Hma1.2p1_0298F.1 3 CH_hma_244 2 2 0.000333259
Lupinus albus Lalb_Chr23 3 CH_lal_363 2 2 0.000524824
Malus domestica Chr05 3 CH_mdo_596 2 2 0.000379212
Physcomitrium patens Chr01 3 CH_ppa_124 2 2 0.000183818
Rosa chinensis RcHm_v2.0_Chr4 3 CH_rch_84 5 5 0.00000000000000238705
Trochodendron aralioides group9 3 CH_tar_151 3 3 0.000000454168
Trochodendron aralioides group1 3 CH_tar_50 4 4 0.000000000081805
Theobroma cacao Chromosome_9 3 CH_tca_356 2 2 0.000439432
Tripterygium wilfordii NC_052253.1 3 CH_twi_31 5 9 0.000000000000512491
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_340 2 2 0.000557543
Acer truncatum chr6 4 CH_acertr_438 2 2 0.000422982
Actinidia chinensis Lachesis_group8 4 CH_ach_251 2 2 0.000814819
Arabidopsis lyrata scaffold_6 4 CH_aly_322 2 2 0.000660044
Amborella trichopoda AmTr_v1.0_scaffold00106 4 CH_atr_97 3 4 0.000000151455
Brassica carinata ChrB03 4 CH_bca_699 2 2 0.000213764
Brassica napus C08 4 CH_bna_600 2 2 0.000519726
Capsicum annuum PGAv.1.6.scaffold1014 4 CH_can_290 2 2 0.0000826105
Chara braunii BFEA01000064 4 CH_cbr_136 2 2 0.000215781
Ceratophyllum demersum 2 4 CH_cde_172 2 2 0.000473878
Durio zibethinus NW_019168004.1 4 CH_dzi_208 3 22 0.0000495704
Fragaria x ananassa Fvb4-1 4 CH_fan_179 3 3 0.000000497659
Fragaria vesca Fvb4 4 CH_fve_57 4 4 0.0000000000429367
Hydrangea macrophylla Hma1.2p1_0298F.1 4 CH_hma_244 2 2 0.000333259
Lupinus albus Lalb_Chr23 4 CH_lal_363 2 2 0.000524824
Malus domestica Chr05 4 CH_mdo_596 2 2 0.000379212
Physcomitrium patens Chr01 4 CH_ppa_124 2 2 0.000183818
Rosa chinensis RcHm_v2.0_Chr4 4 CH_rch_84 5 5 0.00000000000000238705
Trochodendron aralioides group9 4 CH_tar_151 3 3 0.000000454168
Trochodendron aralioides group1 4 CH_tar_50 4 4 0.000000000081805
Theobroma cacao Chromosome_9 4 CH_tca_356 2 2 0.000439432
Tripterygium wilfordii NC_052253.1 4 CH_twi_31 5 9 0.000000000000512491
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_340 2 2 0.000557543

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001