Functional clusters

Information

  • Type Gene Ontology
  • Description regulation of cellular amide metabolic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Coffea canephora chr2 3 CH_ccan_305 3 18 0.000244797
Coffea canephora chr2 4 CH_ccan_305 3 18 0.000244797

Available child term results

Ontology identifier Description Number of clusters
GO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 2
GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening 8
GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA 10
GO:0006417 regulation of translation 8
GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidine 18
GO:0032055 negative regulation of translation in response to stress 2
GO:0035278 miRNA mediated inhibition of translation 56
GO:0045727 positive regulation of translation 18
GO:0045901 positive regulation of translational elongation 18
GO:0045905 positive regulation of translational termination 2
GO:0061158 3'-UTR-mediated mRNA destabilization 4
GO:0072344 rescue of stalled ribosome 12
GO:0080149 sucrose induced translational repression 2
GO:0097167 circadian regulation of translation 4
GO:1900151 regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 2
GO:1900486 positive regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway 8
GO:1900706 positive regulation of siderophore biosynthetic process 96

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001