Functional clusters
Information
- Type Gene Ontology
- Description DNA-templated transcription, termination
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis thaliana | Chr1 | 3 | CH_ath_27 | 9 | 36 | 1.22706e-16 |
| Brassica rapa | A09 | 3 | CH_bra_82 | 4 | 5 | 0.000000230783 |
| Camellia sinensis var. sinensis | Chr11 | 3 | CH_camsi_790 | 2 | 3 | 0.000687821 |
| Daucus carota | DCARv2_Chr1 | 3 | CH_dca_264 | 4 | 16 | 0.000092581 |
| Durio zibethinus | NW_019167960.1 | 3 | CH_dzi_220 | 4 | 12 | 0.0000714956 |
| Durio zibethinus | NW_019168492.1 | 3 | CH_dzi_47 | 6 | 8 | 0.000000000006733 |
| Durio zibethinus | NW_019167904.1 | 3 | CH_dzi_51 | 8 | 39 | 0.0000000000220441 |
| Durio zibethinus | NW_019168026.1 | 3 | CH_dzi_56 | 6 | 10 | 0.0000000000503869 |
| Oryza sativa ssp. japonica | chr11 | 3 | CH_osa_155 | 4 | 5 | 0.000000272465 |
| Oryza sativa ssp. japonica | chr05 | 3 | CH_osa_273 | 3 | 3 | 0.0000516324 |
| Oryza sativa ssp. japonica | chr06 | 3 | CH_osa_43 | 6 | 8 | 0.00000000000157563 |
| Punica granatum | NC_045127.1 | 3 | CH_pgr_57 | 6 | 8 | 0.00000000000347796 |
| Quercus lobata | 12 | 3 | CH_qlo_162 | 8 | 17 | 0.0000000000000218163 |
| Quercus lobata | 6 | 3 | CH_qlo_30 | 12 | 15 | 1.28518e-27 |
| Striga asiatica | scaffold1 | 3 | CH_sas_24 | 3 | 3 | 0.000000703983 |
| Sequoiadendron giganteum | chr2 | 3 | CH_sgi_1340 | 2 | 2 | 0.000730727 |
| Solanum lycopersicum | SL4.0ch04 | 3 | CH_sly_62 | 6 | 7 | 0.000000000000420864 |
| Solanum tuberosum | ST4.03ch04 | 3 | CH_stu_42 | 7 | 7 | 4.59749e-17 |
| Arabidopsis thaliana | Chr1 | 4 | CH_ath_27 | 9 | 36 | 1.22706e-16 |
| Brassica rapa | A09 | 4 | CH_bra_82 | 4 | 5 | 0.000000230783 |
| Camellia sinensis var. sinensis | Chr11 | 4 | CH_camsi_790 | 2 | 3 | 0.000687821 |
| Daucus carota | DCARv2_Chr1 | 4 | CH_dca_264 | 4 | 16 | 0.000092581 |
| Durio zibethinus | NW_019167960.1 | 4 | CH_dzi_220 | 4 | 12 | 0.0000714956 |
| Durio zibethinus | NW_019168492.1 | 4 | CH_dzi_47 | 6 | 8 | 0.000000000006733 |
| Durio zibethinus | NW_019167904.1 | 4 | CH_dzi_51 | 8 | 39 | 0.0000000000220441 |
| Durio zibethinus | NW_019168026.1 | 4 | CH_dzi_56 | 6 | 10 | 0.0000000000503869 |
| Oryza sativa ssp. japonica | chr11 | 4 | CH_osa_155 | 4 | 5 | 0.000000272465 |
| Oryza sativa ssp. japonica | chr05 | 4 | CH_osa_273 | 3 | 3 | 0.0000516324 |
| Oryza sativa ssp. japonica | chr06 | 4 | CH_osa_43 | 6 | 8 | 0.00000000000157563 |
| Punica granatum | NC_045127.1 | 4 | CH_pgr_57 | 6 | 8 | 0.00000000000347796 |
| Quercus lobata | 12 | 4 | CH_qlo_162 | 8 | 17 | 0.0000000000000218163 |
| Quercus lobata | 6 | 4 | CH_qlo_30 | 12 | 15 | 1.28518e-27 |
| Striga asiatica | scaffold1 | 4 | CH_sas_24 | 3 | 3 | 0.000000703983 |
| Sequoiadendron giganteum | chr2 | 4 | CH_sgi_1340 | 2 | 2 | 0.000730727 |
| Solanum lycopersicum | SL4.0ch04 | 4 | CH_sly_62 | 6 | 7 | 0.000000000000420864 |
| Solanum tuberosum | ST4.03ch04 | 4 | CH_stu_42 | 7 | 7 | 4.59749e-17 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0006369 | termination of RNA polymerase II transcription | 42 |
| GO:0006393 | termination of mitochondrial transcription | 2 |
| GO:0060567 | negative regulation of DNA-templated transcription, termination | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |