Functional clusters

Information

  • Type Gene Ontology
  • Description alanyl-tRNA aminoacylation

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Coffea canephora chr2 3 CH_ccan_220 2 19 0.0000638836
Coffea canephora chr11 3 CH_ccan_405 2 8 0.000958224
Davidia involucrata GWHABJS00000004 3 CH_din_397 2 2 0.000750188
Fragaria vesca Fvb2 3 CH_fve_329 2 2 0.000353461
Gossypium hirsutum D12 3 CH_ghi_685 2 2 0.000961256
Glycine max Gm12 3 CH_gma_467 2 2 0.000569336
Malus domestica Chr10 3 CH_mdo_699 2 2 0.000796344
Rosa chinensis RcHm_v2.0_Chr6 3 CH_rch_636 2 2 0.000239192
Sechium edule LG05 3 CH_sed_107 3 4 0.000000610712
Sapria himalayana scaffold50_4036370 3 CH_shi_188 2 3 0.000171536
Solanum lycopersicum SL4.0ch03 3 CH_sly_411 2 2 0.000176082
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_105 3 3 0.000000129529
Zea mays 1 3 CH_zma_31 4 4 0.0000000000140373
Coffea canephora chr2 4 CH_ccan_220 2 19 0.0000638836
Coffea canephora chr11 4 CH_ccan_405 2 8 0.000958224
Davidia involucrata GWHABJS00000004 4 CH_din_397 2 2 0.000750188
Fragaria vesca Fvb2 4 CH_fve_329 2 2 0.000353461
Gossypium hirsutum D12 4 CH_ghi_685 2 2 0.000961256
Glycine max Gm12 4 CH_gma_467 2 2 0.000569336
Malus domestica Chr10 4 CH_mdo_699 2 2 0.000796344
Rosa chinensis RcHm_v2.0_Chr6 4 CH_rch_636 2 2 0.000239192
Sechium edule LG05 4 CH_sed_107 3 4 0.000000610712
Sapria himalayana scaffold50_4036370 4 CH_shi_188 2 3 0.000171536
Solanum lycopersicum SL4.0ch03 4 CH_sly_411 2 2 0.000176082
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_105 3 3 0.000000129529
Zea mays 1 4 CH_zma_31 4 4 0.0000000000140373

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001