Functional clusters
Information
- Type Gene Ontology
- Description alanyl-tRNA aminoacylation
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Coffea canephora | chr2 | 3 | CH_ccan_220 | 2 | 19 | 0.0000638836 |
Coffea canephora | chr11 | 3 | CH_ccan_405 | 2 | 8 | 0.000958224 |
Davidia involucrata | GWHABJS00000004 | 3 | CH_din_397 | 2 | 2 | 0.000750188 |
Fragaria vesca | Fvb2 | 3 | CH_fve_329 | 2 | 2 | 0.000353461 |
Gossypium hirsutum | D12 | 3 | CH_ghi_685 | 2 | 2 | 0.000961256 |
Glycine max | Gm12 | 3 | CH_gma_467 | 2 | 2 | 0.000569336 |
Malus domestica | Chr10 | 3 | CH_mdo_699 | 2 | 2 | 0.000796344 |
Rosa chinensis | RcHm_v2.0_Chr6 | 3 | CH_rch_636 | 2 | 2 | 0.000239192 |
Sechium edule | LG05 | 3 | CH_sed_107 | 3 | 4 | 0.000000610712 |
Sapria himalayana | scaffold50_4036370 | 3 | CH_shi_188 | 2 | 3 | 0.000171536 |
Solanum lycopersicum | SL4.0ch03 | 3 | CH_sly_411 | 2 | 2 | 0.000176082 |
Vaccinium macrocarpon | chr3_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_105 | 3 | 3 | 0.000000129529 |
Zea mays | 1 | 3 | CH_zma_31 | 4 | 4 | 0.0000000000140373 |
Coffea canephora | chr2 | 4 | CH_ccan_220 | 2 | 19 | 0.0000638836 |
Coffea canephora | chr11 | 4 | CH_ccan_405 | 2 | 8 | 0.000958224 |
Davidia involucrata | GWHABJS00000004 | 4 | CH_din_397 | 2 | 2 | 0.000750188 |
Fragaria vesca | Fvb2 | 4 | CH_fve_329 | 2 | 2 | 0.000353461 |
Gossypium hirsutum | D12 | 4 | CH_ghi_685 | 2 | 2 | 0.000961256 |
Glycine max | Gm12 | 4 | CH_gma_467 | 2 | 2 | 0.000569336 |
Malus domestica | Chr10 | 4 | CH_mdo_699 | 2 | 2 | 0.000796344 |
Rosa chinensis | RcHm_v2.0_Chr6 | 4 | CH_rch_636 | 2 | 2 | 0.000239192 |
Sechium edule | LG05 | 4 | CH_sed_107 | 3 | 4 | 0.000000610712 |
Sapria himalayana | scaffold50_4036370 | 4 | CH_shi_188 | 2 | 3 | 0.000171536 |
Solanum lycopersicum | SL4.0ch03 | 4 | CH_sly_411 | 2 | 2 | 0.000176082 |
Vaccinium macrocarpon | chr3_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_105 | 3 | 3 | 0.000000129529 |
Zea mays | 1 | 4 | CH_zma_31 | 4 | 4 | 0.0000000000140373 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |