Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr6 1 CH_camsi_887 6 12 0.000698288
Helianthus annuus HanXRQChr10 1 CH_han_541 12 68 0.000169813
Vanilla planifolia CM028152.1 1 CH_vpl_386 6 13 0.000978626
Camellia sinensis var. sinensis Chr6 2 CH_camsi_887 6 12 0.000698288
Helianthus annuus HanXRQChr10 2 CH_han_541 12 68 0.000169813
Vanilla planifolia CM028152.1 2 CH_vpl_386 6 13 0.000978626

Available child term results

Ontology identifier Description Number of clusters
11.1.1.3 Phytohormone action.abscisic acid.biosynthesis.neoxanthin biosynthesis cofactor (NXD1) 4
11.1.1.5 Phytohormone action.abscisic acid.biosynthesis.xanthoxin oxidase (ABA2) 22
11.1.1.6 Phytohormone action.abscisic acid.biosynthesis.xanthoxin oxidase molybdopterin sulfurase (ABA3) 6
11.1.1.7 Phytohormone action.abscisic acid.biosynthesis.abscisic aldehyde oxidase 71
11.1.2.1.1.1 Phytohormone action.abscisic acid.perception and signalling.receptor activities.cytoplasm-localized receptor complex.receptor component PYL/RCAR 14
11.1.2.1.1.2 Phytohormone action.abscisic acid.perception and signalling.receptor activities.cytoplasm-localized receptor complex.regulatory phosphatase component 10
11.1.2.1.2 Phytohormone action.abscisic acid.perception and signalling.receptor activities.recruitment factor (CAR) 56
11.1.2.1.3 Phytohormone action.abscisic acid.perception and signalling.receptor activities.regulatory phosphatase positive regulator (EAR1) 13
11.1.2.1.4 Phytohormone action.abscisic acid.perception and signalling.receptor activities.plasma membrane-localized receptor (GTG) 18
11.1.2.2 Phytohormone action.abscisic acid.perception and signalling.signal transducer (AIP2) 6
11.1.2.3 Phytohormone action.abscisic acid.perception and signalling.signal transducer (RHA2) 4
11.1.2.4 Phytohormone action.abscisic acid.perception and signalling.signal transducer (KEG) 10
11.1.2.5 Phytohormone action.abscisic acid.perception and signalling.signal transducer (SDIR1) 1
11.1.3.1 Phytohormone action.abscisic acid.conjugation and degradation.abscisic acid UDP-glycosyltransferase 34
11.1.3.2 Phytohormone action.abscisic acid.conjugation and degradation.abscisic acid hydroxylase 8
11.1.4.1 Phytohormone action.abscisic acid.transport.abscisic acid transporter (AIT) 14
11.10 Phytohormone action.signalling peptides 12
11.10.1 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category 6
11.10.1.1.1 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.PIP/PIPL-peptide activity.PIP/PIPL-precursor polypeptide 75
11.10.1.1.2 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.PIP/PIPL-peptide activity.PIP/PIPL peptide receptor (RLK7) 6
11.10.1.10.1 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.CLE-peptide activity.CLE-precursor polypeptide 69
11.10.1.11.1 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.IMA/FEP-peptide activity.IMA/FEP precursor polypeptide 57
11.10.1.12.1 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.PNP-peptide activity.PNP precursor polypeptide 115
11.10.1.12.2 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.PNP-peptide activity.PNP peptide receptor (PNP-R) 22
11.10.1.2.1 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.phytosulfokine activity.pythosulfokine precursor polypeptide (PSK) 22
11.10.1.2.2 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.phytosulfokine activity.pythosulfokine peptide receptor (PSKR) 31
11.10.1.3.1 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.CEP-peptide activity.CEP-precursor polypeptide 153
11.10.1.3.2 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.CEP-peptide activity.CEP-peptide receptor (CEPR) 4
11.10.1.4.1 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.CIF-peptide activity.TWS-precursor polypeptide (TWS1) 16
11.10.1.4.2 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.CIF-peptide activity.CIF-precursor polypeptide 8
11.10.1.4.3 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.CIF-peptide activity.CIF/TWS1-peptide receptor (GSO) 2
11.10.1.5.1 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.IDL-peptide activity.IDA/IDL-precursor polypeptide 4
11.10.1.5.2 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.IDL-peptide activity.IDA/IDL-peptide receptor (HAESA) 4
11.10.1.6.1 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.DVL/ROT-peptide activity.DVL/RTFL-precursor polypeptide 10
11.10.1.7 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.TDL-peptide activity 2
11.10.1.7.1 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.TDL-peptide activity.TDL-precursor polypeptide 20
11.10.1.7.2 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.TDL-peptide activity.TDL-peptide receptor (EMS1/MSP1) 2
11.10.1.8.1 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.GLV/RGF/CLEL-peptide activity.RGF-precursor polypeptide 10
11.10.1.8.2 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.GLV/RGF/CLEL-peptide activity.RGF-peptide receptor (RGFR) 2
11.10.1.9 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.CLE-TDIF-peptide activity 2
11.10.1.9.1 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.CLE-TDIF-peptide activity.TDIF-precursor polypeptide 1
11.10.2.1.1 Phytohormone action.signalling peptides.CRP (cysteine-rich-peptide) category.GASA/GAST-peptide activity.GASA-precursor polypeptide 83
11.10.2.2.1 Phytohormone action.signalling peptides.CRP (cysteine-rich-peptide) category.STIG1-peptide activity.STIG1/GRI-precursor polypeptide 126
11.10.2.3.1 Phytohormone action.signalling peptides.CRP (cysteine-rich-peptide) category.EPF/EPFL-peptide activity.EPF/EPFL-precursor polypeptide 4
11.10.2.4 Phytohormone action.signalling peptides.CRP (cysteine-rich-peptide) category.RALF/RALFL-peptide activity 10
11.10.2.4.1 Phytohormone action.signalling peptides.CRP (cysteine-rich-peptide) category.RALF/RALFL-peptide activity.RALF/RALFL-precursor polypeptide 88
11.10.2.4.2 Phytohormone action.signalling peptides.CRP (cysteine-rich-peptide) category.RALF/RALFL-peptide activity.RALF-peptide receptor (CrRLK1L) 115
11.10.2.4.3 Phytohormone action.signalling peptides.CRP (cysteine-rich-peptide) category.RALF/RALFL-peptide activity.receptor CrRLK1L chaperone (LLG) 50
11.10.2.5.1 Phytohormone action.signalling peptides.CRP (cysteine-rich-peptide) category.EC1-peptide activity.EC1-precursor polypeptide 58
11.2 Phytohormone action.auxin 16
11.2.1 Phytohormone action.auxin.biosynthesis 1
11.2.1.1.1 Phytohormone action.auxin.biosynthesis.indole-3-pyruvic acid (IPyA) pathway.tryptophan aminotransferase 32
11.2.1.1.2 Phytohormone action.auxin.biosynthesis.indole-3-pyruvic acid (IPyA) pathway.flavin-dependent monooxygenase (YUCCA) 47
11.2.1.2.1 Phytohormone action.auxin.biosynthesis.indole-3-acetamide (IAM) pathway.indole-3-acetamide hydrolase 32
11.2.2 Phytohormone action.auxin.perception and signal transduction 2
11.2.2.1 Phytohormone action.auxin.perception and signal transduction.substrate adaptor of SCF ubiquitin ligase (TIR1/AFB) 14
11.2.2.2 Phytohormone action.auxin.perception and signal transduction.transcriptional repressor (IAA/AUX) 24
11.2.2.3 Phytohormone action.auxin.perception and signal transduction.transcriptional co-repressor (TPL/TPR) 2
11.2.3.1 Phytohormone action.auxin.conjugation and degradation.indole-3-acetic acid-amido synthetase 20
11.2.3.2 Phytohormone action.auxin.conjugation and degradation.indole-3-acetic acid carboxyl methyltransferase (MES17) 16
11.2.3.3 Phytohormone action.auxin.conjugation and degradation.SAM dependent carboxyl methyltransferase (IAMT1) 4
11.2.3.4 Phytohormone action.auxin.conjugation and degradation.indole-3-acetic acid dioxygenase 73
11.2.4.1.1 Phytohormone action.auxin.transport.polar auxin transport.auxin transporter (PIN) 41
11.2.4.1.2 Phytohormone action.auxin.transport.polar auxin transport.regulatory kinase (PINOID) 4
11.2.4.1.3 Phytohormone action.auxin.transport.polar auxin transport.regulatory protein (BIG) 27
11.2.4.3 Phytohormone action.auxin.transport.auxin efflux transporter (ABCB19) 2
11.3 Phytohormone action.brassinosteroid 2
11.3.1.1 Phytohormone action.brassinosteroid.biosynthesis.steroid 22-alpha-hydroxylase (DWF4) 2
11.3.1.2 Phytohormone action.brassinosteroid.biosynthesis.steroid 3-dehydrogenase (CPD) 2
11.3.1.3 Phytohormone action.brassinosteroid.biosynthesis.steroid 5-alpha-reductase (DET2) 2
11.3.1.4 Phytohormone action.brassinosteroid.biosynthesis.3-epi-6-deoxocathasterone 23-monooxygenase 4
11.3.1.5 Phytohormone action.brassinosteroid.biosynthesis.6-deoxocastasterone 6-oxidase (BR6OX) 14
11.3.2.1.1 Phytohormone action.brassinosteroid.perception and signal transduction.receptor complex.receptor protein kinase (BRI/BRL) 4
11.3.2.1.2 Phytohormone action.brassinosteroid.perception and signal transduction.receptor complex.co-receptor protein kinase (BAK/SERK) 8
11.3.2.1.3 Phytohormone action.brassinosteroid.perception and signal transduction.receptor complex.receptor kinase inhibitor (BKI) 4
11.3.2.1.4 Phytohormone action.brassinosteroid.perception and signal transduction.receptor complex.signalling protein kinase (BSK) 6
11.3.2.2 Phytohormone action.brassinosteroid.perception and signal transduction.protein phosphatase (BSU/BSL) 6
11.3.2.3 Phytohormone action.brassinosteroid.perception and signal transduction.protein kinase (BIN2) 8
11.3.2.4 Phytohormone action.brassinosteroid.perception and signal transduction.transcription factor (BES/BZR) 4
11.3.2.5 Phytohormone action.brassinosteroid.perception and signal transduction.scaffold protein (TTL) 10
11.3.3.1 Phytohormone action.brassinosteroid.conjugation and degradation.steroid sulphotransferase 52
11.3.3.2 Phytohormone action.brassinosteroid.conjugation and degradation.brassinosteroid hydroxylase (CYP72B) 4
11.3.3.3 Phytohormone action.brassinosteroid.conjugation and degradation.brassinosteroid hydroxylase (CYP72C) 2
11.3.3.4 Phytohormone action.brassinosteroid.conjugation and degradation.brassinosteroid acyltransferase (PIZZA) 2
11.4 Phytohormone action.cytokinin 8
11.4.1.1 Phytohormone action.cytokinin.biosynthesis.adenylate isopentenyltransferase 19
11.4.1.2 Phytohormone action.cytokinin.biosynthesis.cytokinin phosphoribohydrolase 4
11.4.2.1 Phytohormone action.cytokinin.perception and signal transduction.receptor protein (AHK) 6
11.4.2.2 Phytohormone action.cytokinin.perception and signal transduction.signal transducer (AHP) 18
11.4.2.3 Phytohormone action.cytokinin.perception and signal transduction.signalling pathway activator (CKI1) 11
11.4.2.4 Phytohormone action.cytokinin.perception and signal transduction.B-type ARR response activator 11
11.4.2.5 Phytohormone action.cytokinin.perception and signal transduction.A-type ARR response negative regulator 8
11.4.3 Phytohormone action.cytokinin.conjugation and degradation 14
11.4.3.1 Phytohormone action.cytokinin.conjugation and degradation.UDP-dependent glycosyl transferase 106
11.4.3.2 Phytohormone action.cytokinin.conjugation and degradation.cytokinin dehydrogenase 28
11.5.1.1 Phytohormone action.ethylene.biosynthesis.1-aminocyclopropane-1-carboxylate (ACC) synthase 21
11.5.1.2 Phytohormone action.ethylene.biosynthesis.1-aminocyclopropane-1-carboxylate (ACC) oxidase 44
11.5.1.3 Phytohormone action.ethylene.biosynthesis.regulatory substrate adaptor of CUL3-BTB E3 ubiquitin ligase (ETO) 4
11.5.2.1 Phytohormone action.ethylene.perception and signal transduction.receptor protein (ETR/ERS) 4
11.5.2.3 Phytohormone action.ethylene.perception and signal transduction.receptor regulatory factor (TRP1) 8
11.5.2.4 Phytohormone action.ethylene.perception and signal transduction.signal modulator (ARGOS) 24
11.5.2.5 Phytohormone action.ethylene.perception and signal transduction.signal transducer EIN2 kinase (CTR1) 2
11.5.2.6 Phytohormone action.ethylene.perception and signal transduction.signal transducer (EIN2) 16
11.5.2.7 Phytohormone action.ethylene.perception and signal transduction.EIN2-stabilizing factor (MHZ3) 12
11.5.2.8 Phytohormone action.ethylene.perception and signal transduction.signal transducer (EIN3/EIL) 22
11.5.2.9 Phytohormone action.ethylene.perception and signal transduction.EIN3-substrate-adaptor of SCF ubiquitin protein ligase complex (EBF) 8
11.6 Phytohormone action.gibberellin 4
11.6.1 Phytohormone action.gibberellin.biosynthesis 12
11.6.1.1 Phytohormone action.gibberellin.biosynthesis.ent-copalyl diphosphate synthase 30
11.6.1.2 Phytohormone action.gibberellin.biosynthesis.ent-kaurene synthase 33
11.6.1.3 Phytohormone action.gibberellin.biosynthesis.ent-kaurene oxidase 50
11.6.1.4 Phytohormone action.gibberellin.biosynthesis.ent-kaurenoic acid oxidase 43
11.6.1.5 Phytohormone action.gibberellin.biosynthesis.gibberellin 20-oxidase 15
11.6.1.6 Phytohormone action.gibberellin.biosynthesis.gibberellin 3-oxidase 61
11.6.2.1 Phytohormone action.gibberellin.perception and signal transduction.receptor protein (GID1) 2
11.6.2.2 Phytohormone action.gibberellin.perception and signal transduction.signal transducer (DELLA) 2
11.6.2.3 Phytohormone action.gibberellin.perception and signal transduction.substrate adaptor of SCF ubiquitin ligase (SLY) 12
11.6.3 Phytohormone action.gibberellin.modification and degradation 1
11.6.3.1 Phytohormone action.gibberellin.modification and degradation.gibberellin modification enzyme (ELA) 56
11.6.3.2 Phytohormone action.gibberellin.modification and degradation.SAM-dependent carboxyl methyltransferase (GAMT) 4
11.6.3.3 Phytohormone action.gibberellin.modification and degradation.gibberellin-A12 hydration enzyme (GAS2) 4
11.6.3.4 Phytohormone action.gibberellin.modification and degradation.gibberellin 2-oxidase (Ga2-Ox) 12
11.6.4.1 Phytohormone action.gibberellin.transport.multi-functional transporter (NPF3.1) 23
11.7.1.1 Phytohormone action.jasmonic acid.biosynthesis.phospholipase A (DAD1) 47
11.7.1.2 Phytohormone action.jasmonic acid.biosynthesis.13-lipoxygenase (LOX) 88
11.7.1.3 Phytohormone action.jasmonic acid.biosynthesis.allene oxidase synthase (AOS) 57
11.7.1.4 Phytohormone action.jasmonic acid.biosynthesis.allene oxidase cyclase (AOC) 54
11.7.1.6 Phytohormone action.jasmonic acid.biosynthesis.oxophytodienoate reductase (OPR3) 35
11.7.1.7 Phytohormone action.jasmonic acid.biosynthesis.OPC-8:CoA synthetase (ACS) 39
11.7.1.8 Phytohormone action.jasmonic acid.biosynthesis.OPC-8:CoA oxidase (ACX1) 16
11.7.1.9 Phytohormone action.jasmonic acid.biosynthesis.acyl-CoA thioesterase (ACH) 38
11.7.2.1.1 Phytohormone action.jasmonic acid.perception and signal transduction.receptor complex.component COI 14
11.7.2.1.2 Phytohormone action.jasmonic acid.perception and signal transduction.receptor complex.component JAZ 7
11.7.3 Phytohormone action.jasmonic acid.conjugation and degradation 2
11.7.3.1 Phytohormone action.jasmonic acid.conjugation and degradation.SAM-dependent carboxyl methyltransferase 19
11.7.3.2 Phytohormone action.jasmonic acid.conjugation and degradation.jasmonoyl-amino acid synthetase (JAR1) 25
11.7.3.3 Phytohormone action.jasmonic acid.conjugation and degradation.jasmonoyl-amino acid carboxylase 14
11.7.3.4 Phytohormone action.jasmonic acid.conjugation and degradation.jasmonoyl-amino acid hydroxylase 20
11.8.1.1 Phytohormone action.salicylic acid.biosynthesis.isochorismate synthase 16
11.8.2.1 Phytohormone action.salicylic acid.perception and signal transduction.receptor protein (NPR3/4) 12
11.8.3.3 Phytohormone action.salicylic acid.conjugation and degradation.UDP-dependent glycosyl transferase 56
11.8.3.4 Phytohormone action.salicylic acid.conjugation and degradation.salicylic acid 3-hydroxylase (DLO) 39
11.8.4.1 Phytohormone action.salicylic acid.transport.salicylic acid transporter (EDS5) 2
11.9.1 Phytohormone action.strigolactone.biosynthesis 2
11.9.1.1 Phytohormone action.strigolactone.biosynthesis.carotenoid isomerase (DWARF27) 2
11.9.1.2 Phytohormone action.strigolactone.biosynthesis.carotenoid cleavage dioxygenase (CCD7) 14
11.9.1.3 Phytohormone action.strigolactone.biosynthesis.carotenoid cleavage dioxygenase (CCD8) 11
11.9.1.4 Phytohormone action.strigolactone.biosynthesis.monooxygenase (MAX1) 20
11.9.1.5 Phytohormone action.strigolactone.biosynthesis.oxidoreductase (LBO) 8
11.9.2.1 Phytohormone action.strigolactone.perception and signal transduction.receptor protein (D14) 8
11.9.2.2 Phytohormone action.strigolactone.perception and signal transduction.signal transducer (MAX2) 7
11.9.2.4 Phytohormone action.strigolactone.perception and signal transduction.signal transducer (KUF1) 16
11.9.2.5 Phytohormone action.strigolactone.perception and signal transduction.signal transducer (DLK2) 7

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001