Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.abscisic acid.biosynthesis.xanthoxin oxidase (ABA2)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Beta vulgaris Chr3_EL10_PGA_scaffold7 1 CH_bvu_183 2 2 0.0000827917
Glycine max Gm11 1 CH_gma_362 2 3 0.000113865
Malus domestica Chr07 1 CH_mdo_477 2 2 0.000113763
Phaseolus vulgaris Chr05 1 CH_pvu_291 2 2 0.0000734727
Quercus lobata 4 1 CH_qlo_766 2 3 0.000154883
Solanum lycopersicum SL4.0ch04 1 CH_sly_392 2 3 0.000176077
Solanum pennellii Spenn-ch04 1 CH_spe_464 2 3 0.000400297
Solanum tuberosum ST4.03ch04 1 CH_stu_444 2 3 0.000153732
Tripterygium wilfordii NC_052240.1 1 CH_twi_312 2 2 0.00083626
Tripterygium wilfordii NC_052252.1 1 CH_twi_37 4 4 0.00000000000779829
Vigna mungo CM024079.1 1 CH_vmu_209 2 2 0.0000646141
Beta vulgaris Chr3_EL10_PGA_scaffold7 2 CH_bvu_183 2 2 0.0000827917
Glycine max Gm11 2 CH_gma_362 2 3 0.000113865
Malus domestica Chr07 2 CH_mdo_477 2 2 0.000113763
Phaseolus vulgaris Chr05 2 CH_pvu_291 2 2 0.0000734727
Quercus lobata 4 2 CH_qlo_766 2 3 0.000154883
Solanum lycopersicum SL4.0ch04 2 CH_sly_392 2 3 0.000176077
Solanum pennellii Spenn-ch04 2 CH_spe_464 2 3 0.000400297
Solanum tuberosum ST4.03ch04 2 CH_stu_444 2 3 0.000153732
Tripterygium wilfordii NC_052240.1 2 CH_twi_312 2 2 0.00083626
Tripterygium wilfordii NC_052252.1 2 CH_twi_37 4 4 0.00000000000779829
Vigna mungo CM024079.1 2 CH_vmu_209 2 2 0.0000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001