Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.jasmonic acid.biosynthesis.OPC-8:CoA oxidase (ACX1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr12 1 CH_camsi_487 3 23 0.0000223254
Erigeron canadensis Conyza_canadensis_scaffold:1 1 CH_eca_272 2 2 0.0000448722
Fragaria x ananassa Fvb5-1 1 CH_fan_211 3 11 0.00000169441
Rosa chinensis RcHm_v2.0_Chr3 1 CH_rch_704 2 3 0.000358775
Salix brachista GWHAAZH00000001 1 CH_sbr_364 2 3 0.000567096
Solanum lycopersicum SL4.0ch08 1 CH_sly_335 2 2 0.0000586941
Solanum pennellii Spenn-ch08 1 CH_spe_291 2 2 0.000044479
Solanum tuberosum ST4.03ch08 1 CH_stu_386 2 2 0.0000512453
Camellia sinensis var. sinensis Chr12 2 CH_camsi_487 3 23 0.0000223254
Erigeron canadensis Conyza_canadensis_scaffold:1 2 CH_eca_272 2 2 0.0000448722
Fragaria x ananassa Fvb5-1 2 CH_fan_211 3 11 0.00000169441
Rosa chinensis RcHm_v2.0_Chr3 2 CH_rch_704 2 3 0.000358775
Salix brachista GWHAAZH00000001 2 CH_sbr_364 2 3 0.000567096
Solanum lycopersicum SL4.0ch08 2 CH_sly_335 2 2 0.0000586941
Solanum pennellii Spenn-ch08 2 CH_spe_291 2 2 0.000044479
Solanum tuberosum ST4.03ch08 2 CH_stu_386 2 2 0.0000512453

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001