Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.strigolactone.biosynthesis.carotenoid cleavage dioxygenase (CCD7)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr3 1 CH_acertr_89 3 3 0.000000007455
Cannabis sativa NC_044374.1 1 CH_cansat_229 2 2 0.0000656642
Lupinus albus Lalb_Chr03 1 CH_lal_206 2 2 0.0000524824
Lactuca sativa Lsat_1_v8_lg_3 1 CH_lsa_299 3 32 0.0000196425
Rosa chinensis RcHm_v2.0_Chr1 1 CH_rch_333 3 7 0.000000834201
Rosa chinensis RcHm_v2.0_Chr1 1 CH_rch_731 2 2 0.000398653
Trifolium pratense Tp57577_TGAC_v2_LG6 1 CH_tpr_237 2 2 0.0000756974
Acer truncatum chr3 2 CH_acertr_89 3 3 0.000000007455
Cannabis sativa NC_044374.1 2 CH_cansat_229 2 2 0.0000656642
Lupinus albus Lalb_Chr03 2 CH_lal_206 2 2 0.0000524824
Lactuca sativa Lsat_1_v8_lg_3 2 CH_lsa_299 3 32 0.0000196425
Rosa chinensis RcHm_v2.0_Chr1 2 CH_rch_333 3 7 0.000000834201
Rosa chinensis RcHm_v2.0_Chr1 2 CH_rch_731 2 2 0.000398653
Trifolium pratense Tp57577_TGAC_v2_LG6 2 CH_tpr_237 2 2 0.0000756974

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001