Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.gibberellin.biosynthesis.ent-kaurenoic acid oxidase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr9 1 CH_camsi_626 2 3 0.000137561
Cicer arietinum L. Ca_LG1_v3 1 CH_car_165 2 2 0.0000778301
Citrus clementina scaffold_5 1 CH_ccl_138 3 5 0.000000100932
Daucus carota DCARv2_Chr6 1 CH_dca_116 3 3 0.000000122031
Erigeron canadensis Conyza_canadensis_scaffold:2 1 CH_eca_496 2 4 0.00080764
Helianthus annuus HanXRQChr09 1 CH_han_644 2 2 0.000386429
Helianthus annuus HanXRQChr13 1 CH_han_645 2 2 0.000386429
Hydrangea macrophylla Hma1.2p1_0023F.1 1 CH_hma_353 2 2 0.000333259
Lotus japonicus chr3 1 CH_lja_41 4 4 0.00000000000109705
Lactuca sativa Lsat_1_v8_lg_4 1 CH_lsa_400 2 2 0.000154202
Malus domestica Chr08 1 CH_mdo_721 2 3 0.000682551
Marchantia polymorpha scaffold_130 1 CH_mpo_105 2 2 0.000331327
Oryza sativa ssp. japonica chr06 1 CH_osa_19 5 10 0.0000000000000147032
Physcomitrium patens Chr20 1 CH_ppa_97 2 2 0.0000612726
Quercus lobata CM012294 1 CH_qlo_677 2 2 0.0000516289
Rhododendron simsii chr07 1 CH_rsi_157 3 4 0.0000000249853
Striga asiatica scaffold14 1 CH_sas_9 3 3 0.0000000234661
Sequoiadendron giganteum chr10 1 CH_sgi_320 4 9 0.000000000218469
Selenicereus undatus Scaffold_2055 1 CH_sun_130 2 2 0.0000726639
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_41 4 4 0.00000000000240748
Zea mays 9 1 CH_zma_157 2 2 0.0000511313
Camellia sinensis var. sinensis Chr9 2 CH_camsi_626 2 3 0.000137561
Cicer arietinum L. Ca_LG1_v3 2 CH_car_165 2 2 0.0000778301
Citrus clementina scaffold_5 2 CH_ccl_138 3 5 0.000000100932
Daucus carota DCARv2_Chr6 2 CH_dca_116 3 3 0.000000122031
Erigeron canadensis Conyza_canadensis_scaffold:2 2 CH_eca_496 2 4 0.00080764
Eucalyptus grandis Chr06 2 CH_egr_688 2 2 0.0000585274
Helianthus annuus HanXRQChr09 2 CH_han_644 2 2 0.000386429
Helianthus annuus HanXRQChr13 2 CH_han_645 2 2 0.000386429
Hydrangea macrophylla Hma1.2p1_0023F.1 2 CH_hma_353 2 2 0.000333259
Lotus japonicus chr3 2 CH_lja_41 4 4 0.00000000000109705
Lactuca sativa Lsat_1_v8_lg_4 2 CH_lsa_400 2 2 0.000154202
Malus domestica Chr08 2 CH_mdo_721 2 3 0.000682551
Marchantia polymorpha scaffold_130 2 CH_mpo_105 2 2 0.000331327
Oryza sativa ssp. japonica chr06 2 CH_osa_19 5 10 0.0000000000000147032
Physcomitrium patens Chr20 2 CH_ppa_97 2 2 0.0000612726
Quercus lobata CM012294 2 CH_qlo_677 2 2 0.0000516289
Rhododendron simsii chr07 2 CH_rsi_157 3 4 0.0000000249853
Striga asiatica scaffold14 2 CH_sas_9 3 3 0.0000000234661
Sequoiadendron giganteum chr10 2 CH_sgi_320 4 9 0.000000000218469
Selenicereus undatus Scaffold_2055 2 CH_sun_130 2 2 0.0000726639
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_41 4 4 0.00000000000240748
Zea mays 9 2 CH_zma_157 2 2 0.0000511313

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001