Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.gibberellin.modification and degradation.gibberellin modification enzyme (ELA)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-11 1 CH_aar_161 2 2 0.0000912326
Acer truncatum chr5 1 CH_acertr_560 2 2 0.00070497
Actinidia chinensis Lachesis_group20 1 CH_ach_269 2 2 0.000814819
Arabidopsis thaliana Chr5 1 CH_ath_223 2 2 0.0000286492
Camellia sinensis var. sinensis Chr4 1 CH_camsi_136 4 6 0.000000000151843
Coffea canephora chr1 1 CH_ccan_380 2 9 0.000919892
Cardamine hirsuta Chr6 1 CH_chi_241 2 2 0.0000691204
Carya illinoinensis Chr14 1 CH_cil_225 4 19 0.000000193468
Durio zibethinus NW_019167926.1 1 CH_dzi_91 4 12 0.000000147769
Eutrema salsugineum scaffold_6 1 CH_esa_178 2 2 0.0000761499
Fragaria vesca Fvb7 1 CH_fve_166 3 3 0.000000437284
Glycine max Gm18 1 CH_gma_514 2 2 0.000379557
Lonicera japonica GWHAAZE00000002 1 CH_lonja_230 3 3 0.000000451913
Magnolia biondii Chr03 1 CH_mbi_337 2 3 0.0000485661
Malus domestica Chr03 1 CH_mdo_231 3 3 0.000000355915
Manihot esculenta Chromosome18 1 CH_mes_22 9 12 7.87797e-23
Manihot esculenta Chromosome04 1 CH_mes_42 7 9 5.08406e-17
Nelumbo nucifera chr7 1 CH_nnu_468 2 2 0.000915631
Nelumbo nucifera chr5 1 CH_nnu_469 2 2 0.000915631
Punica granatum NC_045131.1 1 CH_pgr_367 2 2 0.000750356
Prunus persica Pp02 1 CH_ppe_263 3 6 0.00000934391
Papaver somniferum NC_039366.1 1 CH_pso_255 3 6 0.000000152178
Papaver somniferum NC_039368.1 1 CH_pso_674 2 3 0.000675676
Quercus lobata 1 1 CH_qlo_310 4 5 0.00000000375626
Quercus lobata 4 1 CH_qlo_587 4 27 0.0000131053
Rosa chinensis RcHm_v2.0_Chr1 1 CH_rch_406 3 6 0.0000078636
Trochodendron aralioides group2 1 CH_tar_52 4 4 0.000000000214251
Vitis vinifera chr15 1 CH_vvi_167 3 3 0.000000303754
Aethionema arabicum LG-11 2 CH_aar_161 2 2 0.0000912326
Acer truncatum chr5 2 CH_acertr_560 2 2 0.00070497
Actinidia chinensis Lachesis_group20 2 CH_ach_269 2 2 0.000814819
Arabidopsis thaliana Chr5 2 CH_ath_223 2 2 0.0000286492
Camellia sinensis var. sinensis Chr4 2 CH_camsi_136 4 6 0.000000000151843
Coffea canephora chr1 2 CH_ccan_380 2 9 0.000919892
Cardamine hirsuta Chr6 2 CH_chi_241 2 2 0.0000691204
Carya illinoinensis Chr14 2 CH_cil_225 4 19 0.000000193468
Durio zibethinus NW_019167926.1 2 CH_dzi_91 4 12 0.000000147769
Eutrema salsugineum scaffold_6 2 CH_esa_178 2 2 0.0000761499
Fragaria vesca Fvb7 2 CH_fve_166 3 3 0.000000437284
Glycine max Gm18 2 CH_gma_514 2 2 0.000379557
Lonicera japonica GWHAAZE00000002 2 CH_lonja_230 3 3 0.000000451913
Magnolia biondii Chr03 2 CH_mbi_337 2 3 0.0000485661
Malus domestica Chr03 2 CH_mdo_231 3 3 0.000000355915
Manihot esculenta Chromosome18 2 CH_mes_22 9 12 7.87797e-23
Manihot esculenta Chromosome04 2 CH_mes_42 7 9 5.08406e-17
Nelumbo nucifera chr7 2 CH_nnu_468 2 2 0.000915631
Nelumbo nucifera chr5 2 CH_nnu_469 2 2 0.000915631
Punica granatum NC_045131.1 2 CH_pgr_367 2 2 0.000750356
Prunus persica Pp02 2 CH_ppe_263 3 6 0.00000934391
Papaver somniferum NC_039366.1 2 CH_pso_255 3 6 0.000000152178
Papaver somniferum NC_039368.1 2 CH_pso_674 2 3 0.000675676
Quercus lobata 1 2 CH_qlo_310 4 5 0.00000000375626
Quercus lobata 4 2 CH_qlo_587 4 27 0.0000131053
Rosa chinensis RcHm_v2.0_Chr1 2 CH_rch_406 3 6 0.0000078636
Trochodendron aralioides group2 2 CH_tar_52 4 4 0.000000000214251
Vitis vinifera chr15 2 CH_vvi_167 3 3 0.000000303754

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001