Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.phytosulfokine activity.pythosulfokine peptide receptor (PSKR)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00029 1 CH_atr_313 2 3 0.000714919
Davidia involucrata GWHABJS00000018 1 CH_din_193 3 11 0.00000618765
Durio zibethinus NW_019168048.1 1 CH_dzi_95 3 3 0.000000180454
Erigeron canadensis Conyza_canadensis_scaffold:8 1 CH_eca_149 3 4 0.00000024161
Fragaria x ananassa Fvb4-3 1 CH_fan_137 4 30 0.000000109231
Fragaria vesca Fvb4 1 CH_fve_60 5 28 0.0000000000531977
Glycine max Gm19 1 CH_gma_549 2 2 0.000569336
Lactuca sativa Lsat_1_v8_lg_3 1 CH_lsa_444 2 2 0.000308404
Magnolia biondii Chr03 1 CH_mbi_142 3 3 0.0000000353808
Malus domestica Chr16 1 CH_mdo_190 3 3 0.0000000431413
Manihot esculenta Chromosome10 1 CH_mes_452 2 2 0.000610631
Prunus persica Pp01 1 CH_ppe_400 2 2 0.000223789
Rosa chinensis RcHm_v2.0_Chr4 1 CH_rch_633 3 38 0.000200756
Trochodendron aralioides group12 1 CH_tar_130 3 3 0.000000108135
Theobroma cacao Chromosome_2 1 CH_tca_389 2 2 0.000439432
Amborella trichopoda AmTr_v1.0_scaffold00029 2 CH_atr_313 2 3 0.000714919
Davidia involucrata GWHABJS00000018 2 CH_din_193 3 11 0.00000618765
Durio zibethinus NW_019168048.1 2 CH_dzi_95 3 3 0.000000180454
Erigeron canadensis Conyza_canadensis_scaffold:8 2 CH_eca_149 3 4 0.00000024161
Eucalyptus grandis Chr10 2 CH_egr_555 3 7 0.00000359547
Fragaria x ananassa Fvb4-3 2 CH_fan_137 4 30 0.000000109231
Fragaria vesca Fvb4 2 CH_fve_60 5 28 0.0000000000531977
Glycine max Gm19 2 CH_gma_549 2 2 0.000569336
Lactuca sativa Lsat_1_v8_lg_3 2 CH_lsa_444 2 2 0.000308404
Magnolia biondii Chr03 2 CH_mbi_142 3 3 0.0000000353808
Malus domestica Chr16 2 CH_mdo_190 3 3 0.0000000431413
Manihot esculenta Chromosome10 2 CH_mes_452 2 2 0.000610631
Prunus persica Pp01 2 CH_ppe_400 2 2 0.000223789
Rosa chinensis RcHm_v2.0_Chr4 2 CH_rch_633 3 38 0.000200756
Trochodendron aralioides group12 2 CH_tar_130 3 3 0.000000108135
Theobroma cacao Chromosome_2 2 CH_tca_389 2 2 0.000439432

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001