Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.PNP-peptide activity.PNP peptide receptor (PNP-R)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_1 1 CH_aly_33 5 9 0.00000000000100415
Arabidopsis thaliana Chr1 1 CH_ath_34 5 22 0.00000000000279256
Capsella rubella scaffold_3 1 CH_cru_235 3 8 0.0000376839
Capsella rubella scaffold_1 1 CH_cru_71 6 64 0.000000000293965
Erythranthe guttata scaffold_6 1 CH_egut_418 2 2 0.000436888
Eutrema salsugineum scaffold_5 1 CH_esa_34 5 9 0.000000000000667191
Glycine max Gm06 1 CH_gma_368 2 2 0.000113867
Lonicera japonica GWHAAZE00000007 1 CH_lonja_455 2 2 0.000179662
Populus trichocarpa Chr13 1 CH_ptr_363 2 2 0.0001734
Quercus lobata 9 1 CH_qlo_878 2 2 0.000309773
Salix brachista GWHAAZH00000013 1 CH_sbr_82 4 15 0.0000000051204
Arabidopsis lyrata scaffold_1 2 CH_aly_33 5 9 0.00000000000100415
Arabidopsis thaliana Chr1 2 CH_ath_34 5 22 0.00000000000279256
Capsella rubella scaffold_3 2 CH_cru_235 3 8 0.0000376839
Capsella rubella scaffold_1 2 CH_cru_71 6 64 0.000000000293965
Erythranthe guttata scaffold_6 2 CH_egut_418 2 2 0.000436888
Eutrema salsugineum scaffold_5 2 CH_esa_34 5 9 0.000000000000667191
Glycine max Gm06 2 CH_gma_368 2 2 0.000113867
Lonicera japonica GWHAAZE00000007 2 CH_lonja_455 2 2 0.000179662
Populus trichocarpa Chr13 2 CH_ptr_363 2 2 0.0001734
Quercus lobata 9 2 CH_qlo_878 2 2 0.000309773
Salix brachista GWHAAZH00000013 2 CH_sbr_82 4 15 0.0000000051204

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001