Functional clusters
Information
- Type MapMan
- Description Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.CEP-peptide activity.CEP-precursor polypeptide
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Acer truncatum | chr3 | 1 | CH_acertr_2 | 12 | 21 | 1.91271e-34 |
Actinidia chinensis | Lachesis_group11 | 1 | CH_ach_124 | 2 | 2 | 0.000162964 |
Arabidopsis lyrata | scaffold_8 | 1 | CH_aly_55 | 4 | 4 | 0.000000000284706 |
Amaranthus hybridus | AmaHy_arrow1_Scaffold_2 | 1 | CH_amhyb_259 | 2 | 2 | 0.000841751 |
Aquilegia oxysepala | CHR06 | 1 | CH_aox_45 | 3 | 3 | 0.00000000964818 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.15 | 1 | CH_arhy_229 | 3 | 3 | 0.000000112936 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.05 | 1 | CH_arhy_230 | 3 | 3 | 0.000000112936 |
Amborella trichopoda | AmTr_v1.0_scaffold00157 | 1 | CH_atr_35 | 5 | 7 | 0.000000000000351257 |
Brassica carinata | ChrC06 | 1 | CH_bca_154 | 4 | 5 | 0.00000000401457 |
Brassica carinata | ChrC03 | 1 | CH_bca_399 | 3 | 3 | 0.00000278287 |
Brassica carinata | ChrB04 | 1 | CH_bca_400 | 3 | 3 | 0.00000278287 |
Brassica napus | A07 | 1 | CH_bna_115 | 4 | 4 | 0.00000000141389 |
Brassica napus | C07 | 1 | CH_bna_116 | 4 | 4 | 0.00000000141389 |
Brassica napus | C02 | 1 | CH_bna_144 | 4 | 5 | 0.00000000706759 |
Brassica napus | A02 | 1 | CH_bna_444 | 3 | 5 | 0.0000435282 |
Brassica oleracea | C2 | 1 | CH_bol_184 | 3 | 4 | 0.00000621037 |
Brassica oleracea | C7 | 1 | CH_bol_61 | 4 | 5 | 0.00000000203 |
Brassica rapa | A02 | 1 | CH_bra_182 | 3 | 5 | 0.0000267751 |
Brassica rapa | A07 | 1 | CH_bra_55 | 4 | 4 | 0.000000000920146 |
Cicer arietinum L. | Ca_LG7_v3 | 1 | CH_car_33 | 3 | 3 | 0.0000000363466 |
Corylus avellana | 11 | 1 | CH_cav_411 | 2 | 2 | 0.000460017 |
Citrus clementina | scaffold_7 | 1 | CH_ccl_149 | 3 | 3 | 0.000000201881 |
Carpinus fangiana | Cfa01 | 1 | CH_cfa_341 | 2 | 2 | 0.000454408 |
Cardamine hirsuta | Chr8 | 1 | CH_chi_64 | 4 | 4 | 0.000000000034678 |
Carya illinoinensis | Chr02 | 1 | CH_cil_291 | 3 | 3 | 0.00000558433 |
Carya illinoinensis | Chr01 | 1 | CH_cil_9 | 13 | 14 | 1.86032e-39 |
Citrullus lanatus | CG_Chr01 | 1 | CH_cla_54 | 3 | 3 | 0.000000236102 |
Cucumis melo | chr08 | 1 | CH_cme_271 | 2 | 2 | 0.000400267 |
Corchorus olitorius | AWUE01019240.1 | 1 | CH_col_63 | 2 | 2 | 0.000292099 |
Carica papaya | supercontig_55 | 1 | CH_cpa_49 | 3 | 3 | 0.0000000542279 |
Capsella rubella | scaffold_8 | 1 | CH_cru_169 | 3 | 3 | 0.000000673604 |
Cucumis sativus L. | chr6 | 1 | CH_csa_126 | 3 | 4 | 0.000000418068 |
Daucus carota | DCARv2_Chr7 | 1 | CH_dca_103 | 3 | 3 | 0.0000000610156 |
Davidia involucrata | GWHABJS00000014 | 1 | CH_din_410 | 2 | 2 | 0.000300075 |
Durio zibethinus | NW_019167960.1 | 1 | CH_dzi_119 | 3 | 4 | 0.000000721738 |
Durio zibethinus | NW_019167860.1 | 1 | CH_dzi_96 | 3 | 3 | 0.000000180454 |
Erigeron canadensis | Conyza_canadensis_scaffold:2 | 1 | CH_eca_518 | 2 | 2 | 0.000942317 |
Eucalyptus grandis | Chr09 | 1 | CH_egr_176 | 5 | 5 | 0.0000000000000406647 |
Erythranthe guttata | scaffold_8 | 1 | CH_egut_169 | 3 | 3 | 0.000000159065 |
Eutrema salsugineum | scaffold_6 | 1 | CH_esa_104 | 3 | 3 | 0.000000730677 |
Fragaria x ananassa | Fvb1-3 | 1 | CH_fan_168 | 3 | 3 | 0.000000419082 |
Fragaria x ananassa | Fvb1-1 | 1 | CH_fan_62 | 4 | 5 | 0.000000000290767 |
Fragaria vesca | Fvb1 | 1 | CH_fve_41 | 4 | 4 | 0.0000000000030669 |
Gossypium hirsutum | D03 | 1 | CH_ghi_12 | 9 | 10 | 1.92131e-25 |
Gossypium hirsutum | A02 | 1 | CH_ghi_25 | 7 | 7 | 1.53571e-19 |
Glycine max | Gm11 | 1 | CH_gma_108 | 4 | 4 | 0.00000000207524 |
Glycine max | Gm01 | 1 | CH_gma_109 | 4 | 4 | 0.00000000207524 |
Glycine max | Gm16 | 1 | CH_gma_252 | 3 | 3 | 0.00000497029 |
Glycine max | Gm05 | 1 | CH_gma_253 | 3 | 3 | 0.00000497029 |
Glycine max | Gm17 | 1 | CH_gma_36 | 6 | 7 | 0.00000000000000219697 |
Gossypium raimondii | Chr03 | 1 | CH_gra_1 | 11 | 12 | 6.94057e-33 |
Lupinus albus | Lalb_Chr16 | 1 | CH_lal_125 | 4 | 17 | 0.00000398319 |
Lupinus albus | Lalb_Chr05 | 1 | CH_lal_126 | 3 | 3 | 0.00000400363 |
Lupinus albus | Lalb_Chr05 | 1 | CH_lal_127 | 3 | 3 | 0.00000400363 |
Lotus japonicus | chr4 | 1 | CH_lja_71 | 4 | 5 | 0.000000000691019 |
Lonicera japonica | GWHAAZE00000007 | 1 | CH_lonja_11 | 9 | 11 | 1.29095e-29 |
Lactuca sativa | Lsat_1_v8_lg_3 | 1 | CH_lsa_243 | 3 | 4 | 0.000001902 |
Malus domestica | Chr15 | 1 | CH_mdo_447 | 2 | 2 | 0.000113763 |
Manihot esculenta | Chromosome12 | 1 | CH_mes_119 | 4 | 5 | 0.00000000112692 |
Manihot esculenta | Chromosome13 | 1 | CH_mes_99 | 4 | 4 | 0.00000000022543 |
Nelumbo nucifera | chr1 | 1 | CH_nnu_28 | 5 | 6 | 0.000000000000075138 |
Nelumbo nucifera | chr5 | 1 | CH_nnu_45 | 4 | 4 | 0.0000000000820668 |
Olea europaea | chr15 | 1 | CH_oeu_11 | 6 | 9 | 0.0000000000000101308 |
Olea europaea | chr18 | 1 | CH_oeu_6 | 7 | 9 | 1.27524e-18 |
Prunus persica | Pp07 | 1 | CH_ppe_90 | 4 | 4 | 0.0000000000186815 |
Populus trichocarpa | Chr07 | 1 | CH_ptr_94 | 4 | 4 | 0.0000000000405549 |
Phaseolus vulgaris | Chr03 | 1 | CH_pvu_29 | 6 | 6 | 4.45291e-17 |
Quercus lobata | 6 | 1 | CH_qlo_87 | 6 | 8 | 1.9414e-17 |
Rhododendron simsii | chr10 | 1 | CH_rsi_553 | 2 | 2 | 0.000645307 |
Rhododendron simsii | chr08 | 1 | CH_rsi_554 | 2 | 2 | 0.000645307 |
Salix brachista | GWHAAZH00000007 | 1 | CH_sbr_104 | 3 | 3 | 0.000000119127 |
Sechium edule | LG10 | 1 | CH_sed_115 | 3 | 3 | 0.00000125974 |
Sechium edule | LG14 | 1 | CH_sed_116 | 3 | 3 | 0.00000125974 |
Schrenkiella parvula | ch2-4 | 1 | CH_spa_49 | 4 | 4 | 0.000000000184514 |
Theobroma cacao | Chromosome_1 | 1 | CH_tca_167 | 3 | 3 | 0.000000281615 |
Theobroma cacao | Chromosome_8 | 1 | CH_tca_168 | 3 | 3 | 0.000000281615 |
Trifolium pratense | Tp57577_TGAC_v2_scaf_342 | 1 | CH_tpr_15 | 5 | 6 | 0.000000000000031032 |
Vigna mungo | CM024069.1 | 1 | CH_vmu_108 | 3 | 3 | 0.00000035071 |
Acer truncatum | chr3 | 2 | CH_acertr_2 | 12 | 21 | 1.91271e-34 |
Actinidia chinensis | Lachesis_group11 | 2 | CH_ach_124 | 2 | 2 | 0.000162964 |
Arabidopsis lyrata | scaffold_8 | 2 | CH_aly_55 | 4 | 4 | 0.000000000284706 |
Amaranthus hybridus | AmaHy_arrow1_Scaffold_2 | 2 | CH_amhyb_259 | 2 | 2 | 0.000841751 |
Aquilegia oxysepala | CHR06 | 2 | CH_aox_45 | 3 | 3 | 0.00000000964818 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.15 | 2 | CH_arhy_229 | 3 | 3 | 0.000000112936 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.05 | 2 | CH_arhy_230 | 3 | 3 | 0.000000112936 |
Amborella trichopoda | AmTr_v1.0_scaffold00157 | 2 | CH_atr_35 | 5 | 7 | 0.000000000000351257 |
Brassica carinata | ChrC06 | 2 | CH_bca_154 | 4 | 5 | 0.00000000401457 |
Brassica carinata | ChrC03 | 2 | CH_bca_399 | 3 | 3 | 0.00000278287 |
Brassica carinata | ChrB04 | 2 | CH_bca_400 | 3 | 3 | 0.00000278287 |
Brassica oleracea | C2 | 2 | CH_bol_184 | 3 | 4 | 0.00000621037 |
Brassica oleracea | C7 | 2 | CH_bol_61 | 4 | 5 | 0.00000000203 |
Brassica rapa | A02 | 2 | CH_bra_182 | 3 | 5 | 0.0000267751 |
Brassica rapa | A07 | 2 | CH_bra_55 | 4 | 4 | 0.000000000920146 |
Cicer arietinum L. | Ca_LG7_v3 | 2 | CH_car_33 | 3 | 3 | 0.0000000363466 |
Corylus avellana | 11 | 2 | CH_cav_411 | 2 | 2 | 0.000460017 |
Citrus clementina | scaffold_7 | 2 | CH_ccl_149 | 3 | 3 | 0.000000201881 |
Carpinus fangiana | Cfa01 | 2 | CH_cfa_341 | 2 | 2 | 0.000454408 |
Cardamine hirsuta | Chr8 | 2 | CH_chi_64 | 4 | 4 | 0.000000000034678 |
Carya illinoinensis | Chr02 | 2 | CH_cil_291 | 3 | 3 | 0.00000558433 |
Carya illinoinensis | Chr01 | 2 | CH_cil_9 | 13 | 14 | 1.86032e-39 |
Citrullus lanatus | CG_Chr01 | 2 | CH_cla_54 | 3 | 3 | 0.000000236102 |
Cucumis melo | chr08 | 2 | CH_cme_271 | 2 | 2 | 0.000400267 |
Corchorus olitorius | AWUE01019240.1 | 2 | CH_col_63 | 2 | 2 | 0.000292099 |
Carica papaya | supercontig_55 | 2 | CH_cpa_49 | 3 | 3 | 0.0000000542279 |
Capsella rubella | scaffold_8 | 2 | CH_cru_169 | 3 | 3 | 0.000000673604 |
Cucumis sativus L. | chr6 | 2 | CH_csa_126 | 3 | 4 | 0.000000418068 |
Daucus carota | DCARv2_Chr7 | 2 | CH_dca_103 | 3 | 3 | 0.0000000610156 |
Davidia involucrata | GWHABJS00000014 | 2 | CH_din_410 | 2 | 2 | 0.000300075 |
Durio zibethinus | NW_019167960.1 | 2 | CH_dzi_119 | 3 | 4 | 0.000000721738 |
Durio zibethinus | NW_019167860.1 | 2 | CH_dzi_96 | 3 | 3 | 0.000000180454 |
Erigeron canadensis | Conyza_canadensis_scaffold:2 | 2 | CH_eca_518 | 2 | 2 | 0.000942317 |
Eucalyptus grandis | Chr09 | 2 | CH_egr_176 | 5 | 5 | 0.0000000000000406647 |
Eucalyptus grandis | Chr06 | 2 | CH_egr_505 | 3 | 3 | 0.000000847827 |
Erythranthe guttata | scaffold_8 | 2 | CH_egut_169 | 3 | 3 | 0.000000159065 |
Eutrema salsugineum | scaffold_6 | 2 | CH_esa_104 | 3 | 3 | 0.000000730677 |
Fragaria x ananassa | Fvb1-3 | 2 | CH_fan_168 | 3 | 3 | 0.000000419082 |
Fragaria x ananassa | Fvb1-1 | 2 | CH_fan_62 | 4 | 5 | 0.000000000290767 |
Fragaria vesca | Fvb1 | 2 | CH_fve_41 | 4 | 4 | 0.0000000000030669 |
Gossypium hirsutum | D03 | 2 | CH_ghi_12 | 9 | 10 | 1.92131e-25 |
Gossypium hirsutum | A02 | 2 | CH_ghi_25 | 7 | 7 | 1.53571e-19 |
Glycine max | Gm11 | 2 | CH_gma_108 | 4 | 4 | 0.00000000207524 |
Glycine max | Gm01 | 2 | CH_gma_109 | 4 | 4 | 0.00000000207524 |
Glycine max | Gm16 | 2 | CH_gma_252 | 3 | 3 | 0.00000497029 |
Glycine max | Gm05 | 2 | CH_gma_253 | 3 | 3 | 0.00000497029 |
Glycine max | Gm17 | 2 | CH_gma_36 | 6 | 7 | 0.00000000000000219697 |
Gossypium raimondii | Chr03 | 2 | CH_gra_1 | 11 | 12 | 6.94057e-33 |
Lupinus albus | Lalb_Chr16 | 2 | CH_lal_125 | 4 | 17 | 0.00000398319 |
Lupinus albus | Lalb_Chr05 | 2 | CH_lal_126 | 3 | 3 | 0.00000400363 |
Lupinus albus | Lalb_Chr05 | 2 | CH_lal_127 | 3 | 3 | 0.00000400363 |
Lotus japonicus | chr4 | 2 | CH_lja_71 | 4 | 5 | 0.000000000691019 |
Lonicera japonica | GWHAAZE00000007 | 2 | CH_lonja_11 | 9 | 11 | 1.29095e-29 |
Lactuca sativa | Lsat_1_v8_lg_3 | 2 | CH_lsa_243 | 3 | 4 | 0.000001902 |
Malus domestica | Chr15 | 2 | CH_mdo_447 | 2 | 2 | 0.000113763 |
Manihot esculenta | Chromosome12 | 2 | CH_mes_119 | 4 | 5 | 0.00000000112692 |
Manihot esculenta | Chromosome13 | 2 | CH_mes_99 | 4 | 4 | 0.00000000022543 |
Nelumbo nucifera | chr1 | 2 | CH_nnu_28 | 5 | 6 | 0.000000000000075138 |
Nelumbo nucifera | chr5 | 2 | CH_nnu_45 | 4 | 4 | 0.0000000000820668 |
Olea europaea | chr15 | 2 | CH_oeu_11 | 6 | 9 | 0.0000000000000101308 |
Olea europaea | chr18 | 2 | CH_oeu_6 | 7 | 9 | 1.27524e-18 |
Prunus persica | Pp07 | 2 | CH_ppe_90 | 4 | 4 | 0.0000000000186815 |
Populus trichocarpa | Chr07 | 2 | CH_ptr_94 | 4 | 4 | 0.0000000000405549 |
Phaseolus vulgaris | Chr03 | 2 | CH_pvu_29 | 6 | 6 | 4.45291e-17 |
Quercus lobata | 6 | 2 | CH_qlo_87 | 6 | 8 | 1.9414e-17 |
Rhododendron simsii | chr10 | 2 | CH_rsi_553 | 2 | 2 | 0.000645307 |
Rhododendron simsii | chr08 | 2 | CH_rsi_554 | 2 | 2 | 0.000645307 |
Salix brachista | GWHAAZH00000007 | 2 | CH_sbr_104 | 3 | 3 | 0.000000119127 |
Sechium edule | LG10 | 2 | CH_sed_115 | 3 | 3 | 0.00000125974 |
Sechium edule | LG14 | 2 | CH_sed_116 | 3 | 3 | 0.00000125974 |
Schrenkiella parvula | ch2-4 | 2 | CH_spa_49 | 4 | 4 | 0.000000000184514 |
Theobroma cacao | Chromosome_1 | 2 | CH_tca_167 | 3 | 3 | 0.000000281615 |
Theobroma cacao | Chromosome_8 | 2 | CH_tca_168 | 3 | 3 | 0.000000281615 |
Trifolium pratense | Tp57577_TGAC_v2_scaf_342 | 2 | CH_tpr_15 | 5 | 6 | 0.000000000000031032 |
Vigna mungo | CM024069.1 | 2 | CH_vmu_108 | 3 | 3 | 0.00000035071 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |