Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.gibberellin.biosynthesis.ent-kaurene oxidase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Contig280 1 CH_camsi_707 2 4 0.000275116
Cicer arietinum L. Ca_LG1_v3 1 CH_car_275 2 2 0.000466981
Coffea canephora chr2 1 CH_ccan_54 4 57 0.0000000013728
Cucumis melo chr06 1 CH_cme_47 4 4 0.0000000000623531
Carica papaya supercontig_189 1 CH_cpa_65 3 3 0.00000013557
Chenopodium quinoa C_Quinoa_Scaffold_3472 1 CH_cqu_434 2 2 0.000284293
Cucumis sativus L. chr3 1 CH_csa_147 3 4 0.00000351133
Cucumis sativus L. chr3 1 CH_csa_73 4 6 0.00000000329716
Fragaria x ananassa Fvb7-3 1 CH_fan_174 3 6 0.000000575134
Fragaria vesca Fvb7 1 CH_fve_272 2 2 0.0000589102
Gossypium raimondii Chr04 1 CH_gra_357 2 2 0.000321664
Lotus japonicus chr6 1 CH_lja_30 6 11 0.0000000000000179449
Prunus persica Pp02 1 CH_ppe_86 5 14 0.0000000000097571
Pisum sativum chr6LG2 1 CH_psa_132 3 5 0.000000408112
Phaseolus vulgaris Chr06 1 CH_pvu_361 2 2 0.000220418
Quercus lobata 12 1 CH_qlo_554 3 14 0.0000058188
Rosa chinensis RcHm_v2.0_Chr1 1 CH_rch_775 2 4 0.000717527
Salvia bowleyana GWHASIU00000003 1 CH_sbo_340 2 2 0.000136494
Sechium edule LG09 1 CH_sed_74 4 14 0.0000000381222
Theobroma cacao Chromosome_3 1 CH_tca_399 2 2 0.000439432
Trifolium pratense Tp57577_TGAC_v2_scaf_283 1 CH_tpr_413 2 2 0.000756974
Tripterygium wilfordii NC_052250.1 1 CH_twi_23 5 5 0.000000000000145077
Vigna mungo CM024075.1 1 CH_vmu_297 2 2 0.000193842
Vitis vinifera chr15 1 CH_vvi_277 2 2 0.000076063
Camellia sinensis var. sinensis Contig280 2 CH_camsi_707 2 4 0.000275116
Cicer arietinum L. Ca_LG1_v3 2 CH_car_275 2 2 0.000466981
Coffea canephora chr2 2 CH_ccan_54 4 57 0.0000000013728
Cucumis melo chr06 2 CH_cme_47 4 4 0.0000000000623531
Carica papaya supercontig_189 2 CH_cpa_65 3 3 0.00000013557
Chenopodium quinoa C_Quinoa_Scaffold_3472 2 CH_cqu_434 2 2 0.000284293
Cucumis sativus L. chr3 2 CH_csa_147 3 4 0.00000351133
Cucumis sativus L. chr3 2 CH_csa_73 4 6 0.00000000329716
Eucalyptus grandis Chr04 2 CH_egr_282 4 8 0.000000000210482
Fragaria x ananassa Fvb7-3 2 CH_fan_174 3 6 0.000000575134
Fragaria vesca Fvb7 2 CH_fve_272 2 2 0.0000589102
Gossypium hirsutum A08 2 CH_ghi_904 2 2 0.000961256
Gossypium raimondii Chr04 2 CH_gra_357 2 2 0.000321664
Lotus japonicus chr6 2 CH_lja_30 6 11 0.0000000000000179449
Prunus persica Pp02 2 CH_ppe_86 5 14 0.0000000000097571
Pisum sativum chr6LG2 2 CH_psa_132 3 5 0.000000408112
Phaseolus vulgaris Chr06 2 CH_pvu_361 2 2 0.000220418
Quercus lobata 12 2 CH_qlo_554 3 14 0.0000058188
Rosa chinensis RcHm_v2.0_Chr1 2 CH_rch_775 2 4 0.000717527
Salvia bowleyana GWHASIU00000003 2 CH_sbo_340 2 2 0.000136494
Sechium edule LG09 2 CH_sed_74 4 14 0.0000000381222
Theobroma cacao Chromosome_3 2 CH_tca_399 2 2 0.000439432
Trifolium pratense Tp57577_TGAC_v2_scaf_283 2 CH_tpr_413 2 2 0.000756974
Tripterygium wilfordii NC_052250.1 2 CH_twi_23 5 5 0.000000000000145077
Vigna mungo CM024075.1 2 CH_vmu_297 2 2 0.000193842
Vitis vinifera chr15 2 CH_vvi_277 2 2 0.000076063

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001